Difference between revisions of "Tiso gene 16028"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.138-RXN 2.1.1.138-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
(Created page with "Category:Gene == Gene Tiso_gene_16028 == * right end position: ** 3492 * transcription direction: ** POSITIVE * left end position: ** 1941 * centisome position: ** 41.8228...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.138-RXN 2.1.1.138-RXN] ==
+
== Gene Tiso_gene_16028 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 3492
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.1.1.137 EC-2.1.1.137]
+
** 1941
 +
* centisome position:
 +
** 41.822884   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PEROXID-RXN]]
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[METHYLARSONITE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYLARSINATE]][c]
+
** Source: [[orthology-esiliculosus]]
−
* With common name(s):
+
* Reaction: [[RXN-12440]]
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 methylarsonite[c] '''=>''' 2 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 cacodylate[c]
+
** Source: [[annotation-in-silico_annotation]]
−
 
+
*** Assignment: automated-name-match
−
== Genes associated with this reaction  ==
+
* Reaction: [[RXN-14240]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_16361]]
+
* Reaction: [[RXN-15288]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Reaction: [[RXN-3521]]
−
== Pathways ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-4202]], arsenate detoxification I (glutaredoxin): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4202 PWY-4202]
+
*** Assignment: automated-name-match
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* Reaction: [[RXN-8635]]
−
== Reconstruction information  ==
+
** Source: [[orthology-esiliculosus]]
−
* [[annotation]]:
+
== Pathways associated ==
−
** [[pathwaytools]]:
+
* [[PWY-7214]]
−
*** [[in-silico_annotation]]
+
* [[PWY-6959]]
 +
* [[PWY-5461]]
 +
* [[PWY-7445]]
 +
* [[PWY-6960]]
 +
* [[PWY-6961]]
 +
* [[PWY-2261]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=3492}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11684 11684]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=1941}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05756 R05756]
+
{{#set: centisome position=41.822884    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-3521|RXN-8635}}
−
{{#set: common name=ORF}}
+
{{#set: pathway associated=PWY-7214|PWY-6959|PWY-5461|PWY-7445|PWY-6960|PWY-6961|PWY-2261}}
−
{{#set: ec number=EC-2.1.1.137}}
+
−
{{#set: gene associated=Tiso_gene_16361}}
+
−
{{#set: in pathway=PWY-4202}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:11, 21 March 2018

Gene Tiso_gene_16028

  • right end position:
    • 3492
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1941
  • centisome position:
    • 41.822884
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16028&oldid=46616"