Difference between revisions of "CPD-6224"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6224 CPD-6224] == * smiles: ** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6224 CPD-6224] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))
 
* common name:
 
* common name:
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** polyketide_synthase
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** gibberellin A34
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** acyl-_synthetase
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* inchi key:
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** ORF
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** InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M
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** long_chain_acyl-_synthetase
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* molecular weight:
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* ec number:
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** 347.387   
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
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** GA34
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-17640]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-17641]][c]
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* [[RXN-6550]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 18-hydroxystearate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 18-hydroxystearoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIPID_MAPS : LMPR0104170025
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{{#set: common name=polyketide_synthase}}
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* PUBCHEM:
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{{#set: common name=acyl-_synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245079 25245079]
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{{#set: common name=ORF}}
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* CHEBI:
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{{#set: common name=long_chain_acyl-_synthetase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29593 29593]
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{{#set: ec number=EC-6.2.1.3}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_348|Tiso_gene_500|Tiso_gene_4191|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_7855|Tiso_gene_136}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11868 C11868]
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{{#set: in pathway=PWY-6733}}
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{{#set: smiles=C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=gibberellin A34}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: inchi key=InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=347.387    }}
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{{#set: common name=GA34}}
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{{#set: produced by=RXN-6550}}

Latest revision as of 21:11, 21 March 2018

Metabolite CPD-6224

  • smiles:
    • C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))
  • common name:
    • gibberellin A34
  • inchi key:
    • InChIKey=IGZIQAJJXGRAJF-OQAXFVLUSA-M
  • molecular weight:
    • 347.387
  • Synonym(s):
    • GA34

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CC(O)C(O)2)([CH](CC3)4)5)(C)))C([O-])=O)))" cannot be used as a page name in this wiki.



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