Difference between revisions of "RXN-1125"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-deoxy-d-manno-octul...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1125 RXN-1125] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1125 RXN-1125] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-deoxy-d-manno-octulosonic-acid_transferase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.99.12 EC-2.4.99.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.195 EC-1.1.1.195]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LIPID-IV-A]][c] '''+''' 1 [[CMP-KDO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[CMP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[SINAPALDEHYDE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[SINAPYL-ALCOHOL]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 lipid IVA[c] '''+''' 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''=>''' 1 H+[c] '''+''' 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 CMP[c]
+
** 1 H+[c] '''+''' 1 sinapaldehyde[c] '''+''' 1 NADPH[c] '''=>''' 1 sinapyl alcohol[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14463]]
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* Gene: [[Tiso_gene_15088]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16681]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
−
* Gene: [[Tiso_gene_14462]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
+
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-7675]], Kdo transfer to lipid IVA II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7675 PWY-7675]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
+
** Source: [[orthology-esiliculosus]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pantograph]]
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28066 28066]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04658 R04658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03918 R03918]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-deoxy-d-manno-octulosonic-acid_transferase}}
+
{{#set: ec number=EC-1.1.1.195}}
−
{{#set: ec number=EC-2.4.99.12}}
+
{{#set: gene associated=Tiso_gene_15088|Tiso_gene_16681}}
−
{{#set: gene associated=Tiso_gene_14463|Tiso_gene_14462}}
+
{{#set: in pathway=PWY-361}}
−
{{#set: in pathway=KDOSYN-PWY|PWY-7675}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 21:11, 21 March 2018

Reaction RXN-1125

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1125&oldid=46651"