Difference between revisions of "RXN-2006"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[URACIL]][c] '''+''' 1 [[CPD-15317]][c] '''<=>''' 1 [[PSEUDOURIDINE-5-P]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CPD-514]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[BENZOYLCOA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 uracil[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''<=>''' 1 pseudouridine 5'-phosphate[c] '''+''' 1 H2O[c]
+
** 1 3-oxo-3-phenylpropanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 benzoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6094]]
+
* Gene: [[Tiso_gene_16181]]
−
** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
+
* [[P281-PWY]], 3-phenylpropanoate degradation: [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-481]], ethylbenzene degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-481 PWY-481]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6458]], benzoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6458 PWY-6458]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6443]], benzoate biosynthesis I (CoA-dependent, &beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18337 18337]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05506 R05506]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
+
{{#set: gene associated=Tiso_gene_16181}}
−
** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
+
{{#set: in pathway=P281-PWY|PWY-481|PWY-6458|PWY-6443}}
−
** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
+
−
** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
+
−
** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
+
−
** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
+
−
** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
+
−
** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
+
−
** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
+
−
** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
+
−
** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-4.2.1.70}}
+
−
{{#set: gene associated=Tiso_gene_6094}}
+
−
{{#set: in pathway=PWY-6019}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 

Latest revision as of 21:11, 21 March 2018

Reaction RXN-2006

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-3-phenylpropanoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 benzoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P281-PWY, 3-phenylpropanoate degradation: P281-PWY
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-481, ethylbenzene degradation (anaerobic): PWY-481
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6458, benzoyl-CoA biosynthesis: PWY-6458
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6443, benzoate biosynthesis I (CoA-dependent, β-oxidative): PWY-6443
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-2006&oldid=46655"