Difference between revisions of "RXN-17113"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** acyl-coenzyme_a_oxidase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CADAVERINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[PROTON]][c]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18491]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-18492]][c]
 
* With common name(s):
 
* With common name(s):
** 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 cadaverine[c] '''=>''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 aminopropylcadaverine[c] '''+''' 1 H+[c]
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** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_17803]]
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* Gene: [[Tiso_gene_18566]]
** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[annotation]]
** [[pantograph]]:
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** Source: [[annotation-in-silico_annotation]]
*** [[athaliana]]
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*** Tool: [[pathwaytools]]
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33387 33387]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.5.1}}
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: gene associated=Tiso_gene_17803}}
+
{{#set: ec number=EC-1.3.3.6}}
{{#set: in pathway=PWY0-1303}}
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{{#set: gene associated=Tiso_gene_18566}}
{{#set: reconstruction category=orthology}}
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{{#set: in pathway=PWY-7726}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:11, 21 March 2018

Reaction RXN-17113

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links