Difference between revisions of "RXN-17109"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6972 CPD-6972] == * smiles: ** CC(COP([O-])(=O)OP([O-])(=O)OCC3(C(C(C(N2(C=NC1(C(=NC=NC=12)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6972 CPD-6972] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] ==
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* smiles:
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* direction:
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** CC(COP([O-])(=O)OP([O-])(=O)OCC3(C(C(C(N2(C=NC1(C(=NC=NC=12)N)))O3)O)OP([O-])(=O)[O-]))(C)C(C(NCCC(NCCSC(CCC(C4(C=CC=CC(C([O-])=O)=4))=O)=O)=O)=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KVAQAPQXOXTRAE-UHFFFAOYSA-I
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* common name:
 
* common name:
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** 4-(2'-carboxyphenyl)-4-oxobutyryl-CoA
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** chloroplast_beta-keto_acyl_reductase
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* molecular weight:
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* ec number:
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** 966.676   
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** succinylbenzoyl-CoA
 
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** 2-succinylbenzoyl-CoA
 
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** 2-(3'-carboxypropionyl)benzoyl-CoA
 
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** o-succinylbenzoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[NAPHTHOATE-SYN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-17329]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-18489]][c] '''+''' 1 [[NADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 3-oxo-tetracosatetraenoyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-hydroxy-tetracosatetraenoyl-CoA[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9871]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245100 25245100]
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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* CHEBI:
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{{#set: ec number=EC-1.1.1.330}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15509 15509]
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{{#set: gene associated=Tiso_gene_9871}}
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* BIGG : sbzcoa
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{{#set: in pathway=PWY-7726}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03160 C03160]
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: smiles=CC(COP([O-])(=O)OP([O-])(=O)OCC3(C(C(C(N2(C=NC1(C(=NC=NC=12)N)))O3)O)OP([O-])(=O)[O-]))(C)C(C(NCCC(NCCSC(CCC(C4(C=CC=CC(C([O-])=O)=4))=O)=O)=O)=O)O}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=KVAQAPQXOXTRAE-UHFFFAOYSA-I}}
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{{#set: common name=4-(2'-carboxyphenyl)-4-oxobutyryl-CoA}}
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{{#set: molecular weight=966.676    }}
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{{#set: common name=succinylbenzoyl-CoA|2-succinylbenzoyl-CoA|2-(3'-carboxypropionyl)benzoyl-CoA|o-succinylbenzoyl-CoA}}
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{{#set: consumed by=NAPHTHOATE-SYN-RXN}}
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Latest revision as of 20:11, 21 March 2018

Reaction RXN-17109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-tetracosatetraenoyl-CoA[c] + 1 NADPH[c] + 1 H+[c] => 1 (3R)-hydroxy-tetracosatetraenoyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17109&oldid=46688"