Difference between revisions of "RXN-7663"

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(Created page with "Category:Gene == Gene Tiso_gene_16225 == * left end position: ** 74 * transcription direction: ** POSITIVE * right end position: ** 1981 * centisome position: ** 1.6455415...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16225 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7663 RXN-7663] ==
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* left end position:
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* direction:
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** 74
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** chlorophyll_chloroplastic
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* right end position:
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* ec number:
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** 1981
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** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
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* centisome position:
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** 1.6455415   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-7005]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 chlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''=>''' 1 geranylgeranyl chlorophyll a[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19542]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=74}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=chlorophyll_chloroplastic}}
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{{#set: right end position=1981}}
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{{#set: ec number=EC-2.5.1.62}}
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{{#set: centisome position=1.6455415    }}
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{{#set: gene associated=Tiso_gene_19542}}
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{{#set: reaction associated=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN}}
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{{#set: in pathway=PWY-5064}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|manual-primary_network|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction RXN-7663

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chlorophyll_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chlorophyllide a[c] + 1 H+[c] + 1 geranylgeranyl diphosphate[c] => 1 geranylgeranyl chlorophyll a[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5064, chlorophyll a biosynthesis II: PWY-5064
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7663&oldid=46712"