Difference between revisions of "Tiso gene 1586"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** OR...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1586 == * right end position: ** 8637 * transcription direction: ** POSITIVE * left end position: ** 7270 * centisome position: ** 31.55108...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] ==
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== Gene Tiso_gene_1586 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8637
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 7270
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* centisome position:
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** 31.55108   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[NADH]][c] '''+''' 1 [[HYDRPHENYLAC-CPD]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD3O-4151]][c] '''+''' 1 [[NAD]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADH[c] '''+''' 1 (4-hydroxyphenyl)acetaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 4-tyrosol[c] '''+''' 1 NAD+[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_5425]]
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* [[PWY-7511]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6562]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=8637}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04304 R04304]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=7270}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=31.55108    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: gene associated=Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_6562}}
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{{#set: in pathway=PWY3O-4108|PWY-6802}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_1586

  • right end position:
    • 8637
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7270
  • centisome position:
    • 31.55108
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1586&oldid=46720"