Difference between revisions of "Tiso gene 6705"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** carotenoid_isomeras...")
(Created page with "Category:Gene == Gene Tiso_gene_6705 == * right end position: ** 4496 * transcription direction: ** NEGATIVE * left end position: ** 971 * centisome position: ** 8.14324...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] ==
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== Gene Tiso_gene_6705 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4496
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* common name:
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* transcription direction:
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** carotenoid_isomerase
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** NEGATIVE
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** carotene_isomerase
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* left end position:
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** fad_nad_-binding_oxidoreductase_domain-containing_protein
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** 971
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** carotenoid_isomerase-like_protein
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* centisome position:
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** all-trans-_-dihydroretinol_saturase
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** 8.14324   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.99.23 EC-1.3.99.23]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LYSINE--TRNA-LIGASE-RXN]]
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** 1 [[CPD-13524]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-7247]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 all-trans-retinol[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 an oxidized electron acceptor[c] '''+''' 1 all-trans-13,14-dihydroretinol[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_917]]
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* [[TRNA-CHARGING-PWY]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16794]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13369]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16795]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9534]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13367]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3092]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4496}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19193 19193]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=971}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07163 R07163]
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{{#set: centisome position=8.14324    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=LYSINE--TRNA-LIGASE-RXN}}
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{{#set: common name=carotenoid_isomerase}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: common name=carotene_isomerase}}
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{{#set: common name=fad_nad_-binding_oxidoreductase_domain-containing_protein}}
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{{#set: common name=carotenoid_isomerase-like_protein}}
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{{#set: common name=all-trans-_-dihydroretinol_saturase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.3.99.23}}
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{{#set: gene associated=Tiso_gene_917|Tiso_gene_16794|Tiso_gene_13369|Tiso_gene_16795|Tiso_gene_9534|Tiso_gene_13367|Tiso_gene_3092}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:12, 21 March 2018

Gene Tiso_gene_6705

  • right end position:
    • 4496
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 971
  • centisome position:
    • 8.14324
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6705&oldid=46734"