Difference between revisions of "3.4.24.64-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMALDEHYDE FORMALDEHYDE] == * smiles: ** [CH2]=O * inchi key: ** InChIKey=WSFSSNUMVMOOMR-UHFF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.64-RXN 3.4.24.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mitochondrial_proce...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMALDEHYDE FORMALDEHYDE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.64-RXN 3.4.24.64-RXN] ==
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* smiles:
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* direction:
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** [CH2]=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WSFSSNUMVMOOMR-UHFFFAOYSA-N
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* common name:
 
* common name:
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** formaldehyde
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** mitochondrial_processing_peptidase
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* molecular weight:
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* ec number:
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** 30.026   
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** [http://enzyme.expasy.org/EC/3.4.24.64 EC-3.4.24.64]
 
* Synonym(s):
 
* Synonym(s):
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** formalin
 
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** methanal
 
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** formol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-2881]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[Mitochondrial-Preproteins]][c] '''=>''' 1 [[Peptides-holder]][c] '''+''' 1 [[Processed-Mitochondrial-Proteins]][c]
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* [[RXN-11057]]
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* With common name(s):
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* [[DIMETHYLGLYCINE-DEHYDROGENASE-RXN]]
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** 1 H2O[c] '''+''' 1 a mitochondrial preprotein including a mitochondrial targeting sequence[c] '''=>''' 1 a peptide[c] '''+''' 1 a processed mitochondrial protein[c]
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* [[SARCOSINE-DEHYDROGENASE-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[KETOPANTOALDOLASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5405]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 50-00-0
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* UNIPROT:
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* METABOLIGHTS : MTBLC16842
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** [http://www.uniprot.org/uniprot/P11913 P11913]
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* DRUGBANK : DB03843
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** [http://www.uniprot.org/uniprot/P20069 P20069]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P23955 P23955]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=712 712]
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** [http://www.uniprot.org/uniprot/Q9T2S9 Q9T2S9]
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* HMDB : HMDB01426
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** [http://www.uniprot.org/uniprot/Q9T2S8 Q9T2S8]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P10507 P10507]
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** [http://www.genome.jp/dbget-bin/www_bget?C00067 C00067]
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** [http://www.uniprot.org/uniprot/P29677 P29677]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q03346 Q03346]
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** [http://www.chemspider.com/Chemical-Structure.692.html 692]
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** [http://www.uniprot.org/uniprot/Q41440 Q41440]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9UG64 Q9UG64]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16842 16842]
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** [http://www.uniprot.org/uniprot/Q9P7X1 Q9P7X1]
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* BIGG : fald
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** [http://www.uniprot.org/uniprot/P11914 P11914]
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{{#set: smiles=[CH2]=O}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=WSFSSNUMVMOOMR-UHFFFAOYSA-N}}
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{{#set: common name=mitochondrial_processing_peptidase}}
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{{#set: common name=formaldehyde}}
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{{#set: ec number=EC-3.4.24.64}}
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{{#set: molecular weight=30.026    }}
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{{#set: gene associated=Tiso_gene_5405}}
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{{#set: common name=formalin|methanal|formol}}
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{{#set: in pathway=}}
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{{#set: consumed by=RXN-2881}}
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{{#set: reconstruction category=annotation}}
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{{#set: produced by=RXN-11057|DIMETHYLGLYCINE-DEHYDROGENASE-RXN|SARCOSINE-DEHYDROGENASE-RXN}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: consumed or produced by=KETOPANTOALDOLASE-RXN}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction 3.4.24.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_processing_peptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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