Difference between revisions of "1.3.99.23-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=QUEUINE QUEUINE] == * smiles: ** C([N+]C1(C=CC(O)C(O)1))C2(=CNC3(N=C(NC(=O)C2=3)N)) * inchi key...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** carotenoid_isomeras...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=QUEUINE QUEUINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.23-RXN 1.3.99.23-RXN] ==
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* smiles:
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* direction:
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** C([N+]C1(C=CC(O)C(O)1))C2(=CNC3(N=C(NC(=O)C2=3)N))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WYROLENTHWJFLR-ACLDMZEESA-O
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* common name:
 
* common name:
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** queuine
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** carotenoid_isomerase
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* molecular weight:
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** carotene_isomerase
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** 278.29   
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** fad_nad_-binding_oxidoreductase_domain-containing_protein
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** carotenoid_isomerase-like_protein
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** all-trans-_-dihydroretinol_saturase
 +
** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.99.23 EC-1.3.99.23]
 
* Synonym(s):
 
* Synonym(s):
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** 7-(3,4-trans-4,5-cis-dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanine
 
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** base Q
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[CPD-13524]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CPD-7247]][c] '''+''' 1 [[Acceptor]][c]
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* [[QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN]]
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* With common name(s):
 +
** 1 all-trans-retinol[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 all-trans-13,14-dihydroretinol[c] '''+''' 1 an oxidized electron acceptor[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3092]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13367]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9534]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16795]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_917]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13369]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16794]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=86289319 86289319]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19193 19193]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=77674 77674]
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** [http://www.genome.jp/dbget-bin/www_bget?R07163 R07163]
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* HMDB : HMDB01495
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=C([N+]C1(C=CC(O)C(O)1))C2(=CNC3(N=C(NC(=O)C2=3)N))}}
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{{#set: common name=carotenoid_isomerase}}
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{{#set: inchi key=InChIKey=WYROLENTHWJFLR-ACLDMZEESA-O}}
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{{#set: common name=carotene_isomerase}}
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{{#set: common name=queuine}}
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{{#set: common name=fad_nad_-binding_oxidoreductase_domain-containing_protein}}
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{{#set: molecular weight=278.29    }}
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{{#set: common name=carotenoid_isomerase-like_protein}}
−
{{#set: common name=7-(3,4-trans-4,5-cis-dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanine|base Q}}
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{{#set: common name=all-trans-_-dihydroretinol_saturase}}
−
{{#set: reversible reaction associated=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN}}
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{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.3.99.23}}
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{{#set: gene associated=Tiso_gene_3092|Tiso_gene_13367|Tiso_gene_9534|Tiso_gene_16795|Tiso_gene_917|Tiso_gene_13369|Tiso_gene_16794}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction 1.3.99.23-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carotenoid_isomerase
    • carotene_isomerase
    • fad_nad_-binding_oxidoreductase_domain-containing_protein
    • carotenoid_isomerase-like_protein
    • all-trans-_-dihydroretinol_saturase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinol[c] + 1 a reduced electron acceptor[c] => 1 all-trans-13,14-dihydroretinol[c] + 1 an oxidized electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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