Difference between revisions of "RXN-600"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_14842 == * left end position: ** 40 * transcription direction: ** POSITIVE * right end position: ** 1546 * centisome position: ** 0.7414272...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase * e...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_14842 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
−
* left end position:
+
* direction:
−
** 40
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** dihydroflavonol-4-reductase
−
* right end position:
+
* ec number:
−
** 1546
+
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
−
* centisome position:
+
−
** 0.74142724   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[GLUTAMINESYN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-474]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-590]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 2 H+[c] '''+''' 1 NADPH[c] '''+''' 1 (+)-taxifolin[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[athaliana]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[athaliana]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_15272]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_11016]]
−
* [[GLNSYN-PWY]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-5675]]
+
* Gene: [[Tiso_gene_9503]]
−
* [[PWY-381]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-6549]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[PWY-6964]]
+
* Gene: [[Tiso_gene_9504]]
−
* [[PWY490-3]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-6963]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=40}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
−
{{#set: right end position=1546}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=0.74142724    }}
+
{{#set: common name=dihydroflavonol-4-reductase}}
−
{{#set: reaction associated=GLUTAMINESYN-RXN}}
+
{{#set: ec number=EC-1.1.1.219}}
−
{{#set: pathway associated=GLNSYN-PWY|PWY-5675|PWY-381|PWY-6549|PWY-6964|PWY490-3|PWY-6963}}
+
{{#set: gene associated=Tiso_gene_15272|Tiso_gene_11016|Tiso_gene_9503|Tiso_gene_9504}}
 +
{{#set: in pathway=PWY1F-823}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction RXN-600

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroflavonol-4-reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 NADPH[c] + 1 (+)-taxifolin[c] => 1 NADP+[c] + 1 (2R,3S,4S)-leucocyanidin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-600&oldid=46808"