Difference between revisions of "GDPPYPHOSKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-glutamyl-tRNAGln L-glutamyl-tRNAGln] == * common name: ** an L-glutamyl-[tRNAGln] * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPPYPHOSKIN-RXN GDPPYPHOSKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ppgpp_synthet...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-glutamyl-tRNAGln L-glutamyl-tRNAGln] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPPYPHOSKIN-RXN GDPPYPHOSKIN-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** an L-glutamyl-[tRNAGln]
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** ppgpp_synthetase
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** ca2+-activated_spot-like_protein
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** gtp_pyrophosphokinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.6.5 EC-2.7.6.5]
 
* Synonym(s):
 
* Synonym(s):
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** an L-glutamyl-tRNA(gln)
 
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** glu-tRNA(gln)
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[6.3.5.7-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GUANOSINE-5DP-3DP]][c] '''+''' 1 [[AMP]][c]
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* [[RXN-9386]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 GDP[c] '''+''' 1 ATP[c] '''=>''' 1 ppGpp[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_16305]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_7349]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_6799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=an L-glutamyl-[tRNAGln]}}
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* RHEA:
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{{#set: common name=an L-glutamyl-tRNA(gln)|glu-tRNA(gln)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28098 28098]
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{{#set: consumed by=6.3.5.7-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: produced by=RXN-9386}}
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{{#set: common name=ppgpp_synthetase}}
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{{#set: common name=ca2+-activated_spot-like_protein}}
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{{#set: common name=gtp_pyrophosphokinase}}
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{{#set: ec number=EC-2.7.6.5}}
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{{#set: gene associated=Tiso_gene_16305|Tiso_gene_7349|Tiso_gene_6799}}
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{{#set: in pathway=PPGPPMET-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction GDPPYPHOSKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ppgpp_synthetase
    • ca2+-activated_spot-like_protein
    • gtp_pyrophosphokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP[c] + 1 ATP[c] => 1 ppGpp[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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