Difference between revisions of "RXN-13444"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] == * direction: ** REVERSIBLE * common name: ** Dicarboxylate/tricarboxylate car...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** Dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[CIT]][m] '''+''' 1.0 [[2-KETOGLUTARATE]][c] '''<=>''' 1.0 [[CIT]][c] '''+''' 1.0 [[2-KETOGLUTARATE]][m]
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** 1 [[CPD-14424]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14425]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 citrate[m] '''+''' 1.0 2-oxoglutarate[c] '''<=>''' 1.0 citrate[c] '''+''' 1.0 2-oxoglutarate[m]
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** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Tiso_gene_14857]]
 
** Source: [[orthology-creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[annotation]]
** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
*** Tool: [[pantograph]]
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*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial}}
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{{#set: ec number=EC-4.2.1.134}}
{{#set: gene associated=Tiso_gene_14857}}
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:13, 21 March 2018

Reaction RXN-13444

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] => 1 H2O[c] + 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links