Difference between revisions of "CPD-15637"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15637 CPD-15637] == * smiles: ** CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15637 CPD-15637] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** diphosphomevalonate_decarboxylase
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** 6-cis-tridecenoyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.1.1.33 EC-4.1.1.33]
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** InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J
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* molecular weight:
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** 957.819   
 
* Synonym(s):
 
* Synonym(s):
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** 6Z-tridecenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14771]]
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** 1 [[CPD-641]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 (R)-mevalonate diphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4171]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23732 23732]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659199 90659199]
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* LIGAND-RXN:
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{{#set: smiles=CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
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{{#set: common name=6-cis-tridecenoyl-CoA}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J}}
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** [http://www.uniprot.org/uniprot/P32377 P32377]
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{{#set: molecular weight=957.819    }}
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** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
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{{#set: common name=6Z-tridecenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
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{{#set: consumed by=RXN-14771}}
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** [http://www.uniprot.org/uniprot/O13963 O13963]
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** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
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** [http://www.uniprot.org/uniprot/O23722 O23722]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=diphosphomevalonate_decarboxylase}}
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{{#set: ec number=EC-4.1.1.33}}
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{{#set: gene associated=Tiso_gene_4171}}
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{{#set: in pathway=PWY-922|PWY-7391}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:13, 21 March 2018

Metabolite CPD-15637

  • smiles:
    • CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • 6-cis-tridecenoyl-CoA
  • inchi key:
    • InChIKey=UUIVZEBYPBPKLL-DXAZUOFZSA-J
  • molecular weight:
    • 957.819
  • Synonym(s):
    • 6Z-tridecenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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