Difference between revisions of "Tiso gene 9914"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Gene == Gene Tiso_gene_9914 == * right end position: ** 2894 * transcription direction: ** NEGATIVE * left end position: ** 796 * centisome position: ** 8.8671055...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] ==
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== Gene Tiso_gene_9914 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2894
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.2.52 EC-4.1.2.52]
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** NEGATIVE
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* left end position:
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** 796
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* centisome position:
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** 8.8671055   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PRPPAMIDOTRANS-RXN]]
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** 1 [[CPD-804]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] '''=>''' 1 pyruvate[c] '''+''' 1 succinate semialdehyde[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_13940]]
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== Pathways associated ==
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** [[pantograph]]-[[athaliana]]
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* [[PWY-6121]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6122]]
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== Pathways ==
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* [[PWY-7282]]
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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* [[PWY-6277]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2894}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
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{{#set: left end position=796}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=8.8671055    }}
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{{#set: ec number=EC-4.1.2.52}}
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{{#set: reaction associated=PRPPAMIDOTRANS-RXN}}
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{{#set: gene associated=Tiso_gene_13940}}
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{{#set: pathway associated=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
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{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_9914

  • right end position:
    • 2894
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 796
  • centisome position:
    • 8.8671055
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9914&oldid=46907"