Difference between revisions of "Tiso gene 1474"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-905 RXN-905] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-_dehydrogenase **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1474 == * right end position: ** 18700 * transcription direction: ** POSITIVE * left end position: ** 16245 * centisome position: ** 68.521...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-905 RXN-905] ==
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== Gene Tiso_gene_1474 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 18700
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-_dehydrogenase
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** POSITIVE
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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* left end position:
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** hydroxyacyl-coenzyme_a_mitochondrial
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** 16245
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 68.52117   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[BENZOYLSUCCINYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 benzoylsuccinyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-4961]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Tiso_gene_18838]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14262]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14026]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5857]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=18700}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: left end position=16245}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: centisome position=68.52117    }}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN|RXN0-4961}}
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{{#set: gene associated=Tiso_gene_18838|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_14026|Tiso_gene_5857}}
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{{#set: in pathway=PWY-81}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_1474

  • right end position:
    • 18700
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16245
  • centisome position:
    • 68.52117
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1474&oldid=46921"