Difference between revisions of "Tiso gene 12835"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_12835 == * right end position: ** 2273 * transcription direction: ** NEGATIVE * left end position: ** 89 * centisome position: ** 1.3281599...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] ==
+
== Gene Tiso_gene_12835 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2273
−
* common name:
+
* transcription direction:
−
** folylpolyglutamate_synthase
+
** NEGATIVE
−
** bifunctional_protein
+
* left end position:
−
* ec number:
+
** 89
−
** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
+
* centisome position:
 +
** 1.3281599   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CARBOXYMETHYLENEBUTENOLIDASE-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 ATP[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''=>''' 1 ADP[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 1 phosphate[c]
+
* Reaction: [[RXN-9868]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_92]]
+
* [[PWY-6087]]
−
** IN-SILICO_ANNOTATION
+
* [[PWY-6193]]
−
***EC-NUMBER
+
* [[PWY-6089]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15942]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=2273}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04241 R04241]
+
{{#set: transcription direction=NEGATIVE}}
−
* UNIPROT:
+
{{#set: left end position=89}}
−
** [http://www.uniprot.org/uniprot/P15925 P15925]
+
{{#set: centisome position=1.3281599    }}
−
** [http://www.uniprot.org/uniprot/Q9JVC6 Q9JVC6]
+
{{#set: reaction associated=CARBOXYMETHYLENEBUTENOLIDASE-RXN|RXN-9868}}
−
** [http://www.uniprot.org/uniprot/P43775 P43775]
+
{{#set: pathway associated=PWY-6087|PWY-6193|PWY-6089}}
−
** [http://www.uniprot.org/uniprot/Q9PNK6 Q9PNK6]
+
−
** [http://www.uniprot.org/uniprot/Q9CGE0 Q9CGE0]
+
−
** [http://www.uniprot.org/uniprot/Q50990 Q50990]
+
−
** [http://www.uniprot.org/uniprot/P48760 P48760]
+
−
** [http://www.uniprot.org/uniprot/P08192 P08192]
+
−
** [http://www.uniprot.org/uniprot/O13492 O13492]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=folylpolyglutamate_synthase}}
+
−
{{#set: common name=bifunctional_protein}}
+
−
{{#set: ec number=EC-6.3.2.17}}
+
−
{{#set: gene associated=Tiso_gene_92|Tiso_gene_15942}}
+
−
{{#set: in pathway=PWY-2161}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:13, 21 March 2018

Gene Tiso_gene_12835

  • right end position:
    • 2273
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 89
  • centisome position:
    • 1.3281599
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12835&oldid=46985"