Difference between revisions of "DEOXYADENYLATE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10767 RXN-10767] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha_beta_hydrolase_fold_p...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10767 RXN-10767] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** alpha_beta_hydrolase_fold_protein
 
−
** ORF
 
−
** serine_esterase
 
−
** sialate_o-acetylesterase-like_protein
 
−
** lysophospholipase
 
−
** alpha_beta_hydrolase
 
−
** protein_chloroplastic
 
−
** para-nitrobenzyl_esterase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 +
** [http://enzyme.expasy.org/EC/2.7.4.11 EC-2.7.4.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Methyl-Jasmonates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[Jasmonic-Acids]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[DAMP]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a methyl jasmonate[c] '''+''' 1 H2O[c] '''=>''' 1 methanol[c] '''+''' 1 a jasmonic acid[c] '''+''' 1 H+[c]
+
** 1 ATP[c] '''+''' 1 dAMP[c] '''=>''' 1 dADP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10066]]
+
* Gene: [[Tiso_gene_805]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5837]]
−
* [[Tiso_gene_19778]]
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** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5388]]
−
* [[Tiso_gene_1922]]
+
** Source: [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5839]]
−
* [[Tiso_gene_1538]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_11351]]
+
* Gene: [[Tiso_gene_12257]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_5387]]
−
* [[Tiso_gene_1537]]
+
** Source: [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_19036]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_2556]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9429]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4650]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12686]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16518]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4606]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17029]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-synechocystis]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
* Category: [[annotation]]
−
*** [[in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23100 23100]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01547 R01547]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: ec number=EC-2.7.4.13}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-2.7.4.11}}
−
{{#set: common name=serine_esterase}}
+
{{#set: gene associated=Tiso_gene_805|Tiso_gene_5837|Tiso_gene_5388|Tiso_gene_5839|Tiso_gene_12257|Tiso_gene_5387|Tiso_gene_19036}}
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
{{#set: in pathway=PWY-7224}}
−
{{#set: common name=lysophospholipase}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: common name=alpha_beta_hydrolase}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-synechocystis}}
−
{{#set: common name=protein_chloroplastic}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: common name=para-nitrobenzyl_esterase}}
+
−
{{#set: ec number=EC-3.1.1.1}}
+
−
{{#set: gene associated=Tiso_gene_10066|Tiso_gene_19778|Tiso_gene_1922|Tiso_gene_1538|Tiso_gene_11351|Tiso_gene_1537|Tiso_gene_2556|Tiso_gene_9429|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_17029}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:14, 21 March 2018

Reaction DEOXYADENYLATE-KINASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dAMP[c] => 1 dADP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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