Difference between revisions of "2.4.2.12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCLDH GCLDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate dehydrogenase * Synonym(s...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.12-RXN 2.4.2.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotinamide_phosphor...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCLDH GCLDH] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.12-RXN 2.4.2.12-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycolate dehydrogenase
+
** nicotinamide_phosphoribosyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.2.12 EC-2.4.2.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[Oxidized-ferredoxins]][m] '''+''' 1.0 [[GLYCOLLATE]][m] '''=>''' 1.0 [[Reduced-ferredoxins]][m] '''+''' 1.0 [[GLYOX]][m]
+
** 1 [[PROTON]][c] '''+''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 an oxidized ferredoxin [iron-sulfur] cluster[m] '''+''' 1.0 glycolate[m] '''=>''' 1.0 a reduced ferredoxin [iron-sulfur] cluster[m] '''+''' 1.0 glyoxylate[m]
+
** 1 H+[c] '''+''' 1 nicotinamide[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 β-nicotinamide D-ribonucleotide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17319]]
+
* Gene: [[Tiso_gene_8411]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_6420]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_8186]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_8410]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[NAD-BIOSYNTHESIS-III]], NAD biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-III NAD-BIOSYNTHESIS-III]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16149 16149]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01271 R01271]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycolate dehydrogenase}}
+
{{#set: common name=nicotinamide_phosphoribosyltransferase}}
−
{{#set: gene associated=Tiso_gene_17319|Tiso_gene_6420}}
+
{{#set: ec number=EC-2.4.2.12}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_8411|Tiso_gene_8186|Tiso_gene_8410}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=NAD-BIOSYNTHESIS-III}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:14, 21 March 2018

Reaction 2.4.2.12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nicotinamide_phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 nicotinamide[c] + 1 5-phospho-α-D-ribose 1-diphosphate[c] => 1 diphosphate[c] + 1 β-nicotinamide D-ribonucleotide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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