Difference between revisions of "RXN-15816"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE UDP-GLUCURONATE] == * smiles: ** C(C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)))OP(=O)(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] == * direction: ** LEFT-TO-RIGHT * common name: ** cytochrome_b6-fcomplexiron-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE UDP-GLUCURONATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] ==
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* smiles:
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* direction:
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** C(C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)))OP(=O)([O-])OP(=O)([O-])OC3(OC(C([O-])=O)C(O)C(O)C(O)3)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HDYANYHVCAPMJV-LXQIFKJMSA-K
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* common name:
 
* common name:
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** UDP-α-D-glucuronate
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** cytochrome_b6-fcomplexiron-sulfurchloroplastic
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* molecular weight:
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** ubiquinol-cytochrome_c_reductase
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** 577.265   
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** probable_mitochondrial-processingpeptidasesubunitbeta
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* ec number:
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** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
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** (UDP-GlcA)1
 
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** UDP-D-glucuronic acid
 
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** UDP-glucuronic acid
 
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** udp-glcua
 
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** UDP-glucuronate
 
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** uridine diphosphate glucuronate
 
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** uridine diphosphate glucuronic acid
 
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** UDP-D-glucuronate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14361]]
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* With identifiers:
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* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[ETR-Quinols]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[ETR-Quinones]][c]
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* [[RXN-9000]]
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* With common name(s):
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* [[RXN-10618]]
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** 2 an oxidized c-type cytochrome[e] '''+''' 1 an electron-transfer quinol[c] '''=>''' 2 H+[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 1 an electron-transfer quinone[c]
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* [[RXN-10619]]
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* [[RXN-10616]]
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== Genes associated with this reaction  ==
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* [[RXN-10617]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11060]]
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* Gene: [[Tiso_gene_15926]]
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* [[RXN66-83]]
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** Source: [[annotation-in-silico_annotation]]
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* [[UGDC]]
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*** Assignment: EC-NUMBER
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* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
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* Gene: [[Tiso_gene_7235]]
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* [[RXN-13608]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN-10609]]
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* Gene: [[Tiso_gene_4973]]
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* [[RXN-10608]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN-10607]]
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* Gene: [[Tiso_gene_18330]]
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* [[RXN-10606]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-13607]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[2.4.1.135-RXN]]
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* Gene: [[Tiso_gene_9627]]
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* [[RXN66-168]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-10784]]
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*** Assignment: EC-NUMBER
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* [[2.4.1.225-RXN]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN66-162]]
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*** Assignment: EC-NUMBER
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== Reaction(s) known to produce the compound ==
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== Pathways  ==
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* [[GLCUR1PUT]]
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== Reconstruction information  ==
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== Reaction(s) of unknown directionality ==
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* Category: [[orthology]]
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* [[2.7.7.44-RXN]]
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** Source: [[orthology-esiliculosus]]
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* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 2616-64-0
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC58052
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{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
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* PUBCHEM:
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{{#set: common name=ubiquinol-cytochrome_c_reductase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202620 25202620]
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{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
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* HMDB : HMDB00935
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{{#set: ec number=EC-1.10.2.2}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15926|Tiso_gene_7235|Tiso_gene_4973|Tiso_gene_18330|Tiso_gene_9627}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00167 C00167]
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{{#set: in pathway=}}
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* CHEBI:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58052 58052]
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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* BIGG : udpglcur
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: smiles=C(C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)))OP(=O)([O-])OP(=O)([O-])OC3(OC(C([O-])=O)C(O)C(O)C(O)3)}}
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{{#set: inchi key=InChIKey=HDYANYHVCAPMJV-LXQIFKJMSA-K}}
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{{#set: common name=UDP-α-D-glucuronate}}
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{{#set: molecular weight=577.265    }}
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{{#set: common name=(UDP-GlcA)1|UDP-D-glucuronic acid|UDP-glucuronic acid|udp-glcua|UDP-glucuronate|uridine diphosphate glucuronate|uridine diphosphate glucuronic acid|UDP-D-glucuronate}}
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{{#set: consumed by=RXN-14361|UDP-GLUCURONATE-DECARBOXYLASE-RXN|RXN-9000|RXN-10618|RXN-10619|RXN-10616|RXN-10617|RXN-11060|RXN66-83|UGDC|UDP-GLUCURONOSYLTRANSFERASE-RXN|RXN-13608|RXN-10609|RXN-10608|RXN-10607|RXN-10606|RXN-13607|2.4.1.135-RXN|RXN66-168|RXN-10784|2.4.1.225-RXN|RXN66-162}}
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{{#set: produced by=GLCUR1PUT}}
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{{#set: reversible reaction associated=2.7.7.44-RXN|UDP-GLUCURONATE-4-EPIMERASE-RXN}}
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Latest revision as of 21:14, 21 March 2018

Reaction RXN-15816

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cytochrome_b6-fcomplexiron-sulfurchloroplastic
    • ubiquinol-cytochrome_c_reductase
    • probable_mitochondrial-processingpeptidasesubunitbeta
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15816&oldid=47094"