Difference between revisions of "RXN-16637"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Ketoglutaryl-ACP-methyl-ester 3-Ketoglutaryl-ACP-methyl-ester] == * common name: ** a 3-oxo-g...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16637 RXN-16637] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidyl-trna_hydrolase * e...") |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16637 RXN-16637] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** peptidyl-trna_hydrolase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == Reaction | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | = | + | ** 1 [[WATER]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CYS-tRNAs]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1 H2O[c] '''+''' 1 an L-cysteinyl-[tRNAcys][c] '''=>''' 1 L-cysteine[c] '''+''' 1 H+[c] '''+''' 1 a tRNAcys[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_7443]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14300]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_13800]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-6308]], L-cysteine biosynthesis II (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6308 PWY-6308] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=peptidyl-trna_hydrolase}} |
| − | {{#set: | + | {{#set: ec number=EC-3.1.1.29}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_7443|Tiso_gene_14300|Tiso_gene_13800}} |
| + | {{#set: in pathway=PWY-6308}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 21:14, 21 March 2018
Contents
Reaction RXN-16637
- direction:
- LEFT-TO-RIGHT
- common name:
- peptidyl-trna_hydrolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 Charged-CYS-tRNAs[c] => 1 CYS[c] + 1 PROTON[c] + 1 CYS-tRNAs[c]
- With common name(s):
- 1 H2O[c] + 1 an L-cysteinyl-[tRNAcys][c] => 1 L-cysteine[c] + 1 H+[c] + 1 a tRNAcys[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_7443
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14300
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13800
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
Pathways
- PWY-6308, L-cysteine biosynthesis II (tRNA-dependent): PWY-6308
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
