Difference between revisions of "RXN-16621"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] ==
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* smiles:
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* direction:
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** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L
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* common name:
 
* common name:
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** dAMP
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** 3-oxoacyl-synthase
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* molecular weight:
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* ec number:
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** 329.208   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyadenosine 5'-phosphate
 
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** deoxyadenosine-phosphate
 
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** 2'-deoxyadenosine 5''-monophosphate
 
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** 2'-dAMP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[DEOXYADENYLATE-KINASE-RXN]]
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* With identifiers:
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* [[ATDAM]]
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** 1 [[5Z-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-14195]]
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** 1 a (5Z)-tetradec-5-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* [[DAD2PT]]
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* [[RXN-14215]]
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== Genes associated with this reaction  ==
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* [[RXN0-384]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_5939]]
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* [[DAMPH]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 653-63-4
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC58245
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{{#set: common name=3-oxoacyl-synthase}}
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* PUBCHEM:
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{{#set: ec number=EC-2.3.1.41}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=22848660 22848660]
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{{#set: gene associated=Tiso_gene_5939}}
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* HMDB : HMDB00905
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{{#set: in pathway=PWY-7664}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00360 C00360]
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.chemspider.com/Chemical-Structure.18735032.html 18735032]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58245 58245]
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* BIGG : damp
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{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O}}
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{{#set: inchi key=InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L}}
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{{#set: common name=dAMP}}
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{{#set: molecular weight=329.208    }}
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{{#set: common name=2'-deoxyadenosine 5'-phosphate|deoxyadenosine-phosphate|2'-deoxyadenosine 5''-monophosphate|2'-dAMP}}
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{{#set: consumed by=DEOXYADENYLATE-KINASE-RXN|ATDAM}}
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{{#set: produced by=RXN-14195|DAD2PT|RXN-14215|RXN0-384}}
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{{#set: reversible reaction associated=DAMPH}}
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Latest revision as of 20:15, 21 March 2018

Reaction RXN-16621

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16621&oldid=47171"