Difference between revisions of "RXN-12625"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPA GDPA] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-apyrase * Synonym(s): == Reactio...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == * direction: ** LEFT-TO-RIGHT * common name: ** N,N'-diacetylchitobiose &be...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** N,N'-diacetylchitobiose β-N-acetylglucosaminidase |
| + | ** beta-hexosaminidase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 N,N'-diacetylchitobiose[c] '''+''' 1 H2O[c] '''=>''' 2 N-acetyl-D-glucosamine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_1129]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_14122]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-athaliana]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7822]], chitin degradation III (Serratia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6902]], chitin degradation II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=N,N'-diacetylchitobiose β-N-acetylglucosaminidase}} |
| − | {{#set: gene associated= | + | {{#set: common name=beta-hexosaminidase}} |
| − | {{#set: in pathway=}} | + | {{#set: ec number=EC-3.2.1.52}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: gene associated=Tiso_gene_1129|Tiso_gene_14122}} |
| − | {{#set: reconstruction | + | {{#set: in pathway=PWY-7822|PWY-6902}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 21:15, 21 March 2018
Contents
Reaction RXN-12625
- direction:
- LEFT-TO-RIGHT
- common name:
- N,N'-diacetylchitobiose β-N-acetylglucosaminidase
- beta-hexosaminidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CHITOBIOSE[c] + 1 WATER[c] => 2 N-acetyl-D-glucosamine[c]
- With common name(s):
- 1 N,N'-diacetylchitobiose[c] + 1 H2O[c] => 2 N-acetyl-D-glucosamine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1129
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14122
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
Pathways
- PWY-7822, chitin degradation III (Serratia): PWY-7822
- 2 reactions found over 7 reactions in the full pathway
- PWY-6902, chitin degradation II (Vibrio): PWY-6902
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
