Difference between revisions of "Tiso gene 13817"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANPRIBOSYLTRAN-RXN XANPRIBOSYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xanthin...")
(Created page with "Category:Gene == Gene Tiso_gene_13817 == * right end position: ** 6006 * transcription direction: ** POSITIVE * left end position: ** 4489 * centisome position: ** 74.272...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANPRIBOSYLTRAN-RXN XANPRIBOSYLTRAN-RXN] ==
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== Gene Tiso_gene_13817 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6006
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* common name:
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* transcription direction:
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** xanthine_phosphoribosyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.2.22 EC-2.4.2.22]
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** 4489
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* centisome position:
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** 74.272   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13398]]
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** 1 [[XANTHINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 xanthine[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 XMP[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-7676]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13506]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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* [[SALVPURINE2-PWY]], xanthine and xanthosine salvage: [http://metacyc.org/META/NEW-IMAGE?object=SALVPURINE2-PWY SALVPURINE2-PWY]
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* Reaction: [[RXN-7677]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-5068]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6006}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10800 10800]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=4489}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02142 R02142]
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{{#set: centisome position=74.272    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-13398|RXN-7676|RXN-7677}}
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** [http://www.uniprot.org/uniprot/P43859 P43859]
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{{#set: pathway associated=PWY-5068}}
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** [http://www.uniprot.org/uniprot/P0A9M5 P0A9M5]
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** [http://www.uniprot.org/uniprot/P0A277 P0A277]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=xanthine_phosphoribosyltransferase}}
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{{#set: ec number=EC-2.4.2.22}}
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{{#set: gene associated=Tiso_gene_13506}}
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{{#set: in pathway=SALVPURINE2-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:17, 21 March 2018

Gene Tiso_gene_13817

  • right end position:
    • 6006
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4489
  • centisome position:
    • 74.272
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13817&oldid=47439"