Difference between revisions of "RXN-7968"

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(Created page with "Category:Gene == Gene Tiso_gene_14329 == * left end position: ** 141 * transcription direction: ** POSITIVE * right end position: ** 3346 * centisome position: ** 2.464604...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7968 RXN-7968] == * direction: ** LEFT-TO-RIGHT * common name: ** pentafunctional_protein * ec...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14329 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7968 RXN-7968] ==
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* left end position:
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* direction:
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** 141
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** pentafunctional_protein
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* right end position:
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* ec number:
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** 3346
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** [http://enzyme.expasy.org/EC/1.1.1.282 EC-1.1.1.282]
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* centisome position:
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** 2.464604   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12347]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[SHIKIMATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 shikimate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 H+[c] '''+''' 1 3-dehydroshikimate[c] '''+''' 1 NAD(P)H[c]
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* [[PWY-6795]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5752]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5753]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=141}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17744 17744]
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{{#set: right end position=3346}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=2.464604    }}
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{{#set: common name=pentafunctional_protein}}
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{{#set: reaction associated=RXN-12347}}
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{{#set: ec number=EC-1.1.1.282}}
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{{#set: pathway associated=PWY-6795}}
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{{#set: gene associated=Tiso_gene_5752|Tiso_gene_5753}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:17, 21 March 2018

Reaction RXN-7968

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7968&oldid=47440"