Difference between revisions of "Tiso gene 13367"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-N-ACETYLTRANSFERASE-RXN GLUTAMATE-N-ACETYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Gene == Gene Tiso_gene_13367 == * right end position: ** 2108 * transcription direction: ** POSITIVE * left end position: ** 478 * centisome position: ** 7.531117...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-N-ACETYLTRANSFERASE-RXN GLUTAMATE-N-ACETYLTRANSFERASE-RXN] ==
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== Gene Tiso_gene_13367 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2108
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* common name:
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* transcription direction:
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** n-acetylglutamate_synthase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 478
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** [http://enzyme.expasy.org/EC/2.3.1.35 EC-2.3.1.35]
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* centisome position:
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** 7.531117   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.3.99.23-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''=>''' 1 [[ACETYL-GLU]][c] '''+''' 1 [[L-ORNITHINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-glutamate[c] '''+''' 1 N-acetyl-L-ornithine[c] '''=>''' 1 N-acetyl-L-glutamate[c] '''+''' 1 L-ornithine[c]
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* Reaction: [[RXN-8042]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5365]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11663]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18369]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6475]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2108}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15349 15349]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=478}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02282 R02282]
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{{#set: centisome position=7.531117    }}
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* UNIPROT:
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{{#set: reaction associated=1.3.99.23-RXN|RXN-8042}}
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** [http://www.uniprot.org/uniprot/P38434 P38434]
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{{#set: pathway associated=PWY-6475}}
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** [http://www.uniprot.org/uniprot/Q57645 Q57645]
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** [http://www.uniprot.org/uniprot/Q07908 Q07908]
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** [http://www.uniprot.org/uniprot/Q04728 Q04728]
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** [http://www.uniprot.org/uniprot/P74122 P74122]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=n-acetylglutamate_synthase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.3.1.35}}
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{{#set: gene associated=Tiso_gene_5365|Tiso_gene_11663|Tiso_gene_18369}}
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{{#set: in pathway=ARGSYNBSUB-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_13367

  • right end position:
    • 2108
  • transcription direction:
    • POSITIVE
  • left end position:
    • 478
  • centisome position:
    • 7.531117
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13367&oldid=47460"