Difference between revisions of "Tiso gene 13463"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
(Created page with "Category:Gene == Gene Tiso_gene_13463 == * right end position: ** 4689 * transcription direction: ** POSITIVE * left end position: ** 2389 * centisome position: ** 38.0777...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
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== Gene Tiso_gene_13463 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4689
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* common name:
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* transcription direction:
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** tubulin-tyrosine_ligase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
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** 2389
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* centisome position:
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** 38.07778   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.1.148-RXN]]
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** 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 detyrosinated α-tubulin[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_17589]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_5828]]
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[NONMEVIPP-PWY]]
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* [[Tiso_gene_17450]]
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* [[PWY-7560]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14575]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3379]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10591]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15094]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10440]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15093]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17234]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20330]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9268]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4516]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4689}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=2389}}
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** [http://www.uniprot.org/uniprot/P38160 P38160]
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{{#set: centisome position=38.07778    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.7.1.148-RXN}}
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{{#set: common name=tubulin-tyrosine_ligase}}
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{{#set: pathway associated=NONMEVIPP-PWY|PWY-7560}}
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{{#set: ec number=EC-6.3.2.25}}
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{{#set: gene associated=Tiso_gene_17589|Tiso_gene_5828|Tiso_gene_17450|Tiso_gene_14575|Tiso_gene_3379|Tiso_gene_10591|Tiso_gene_15094|Tiso_gene_10440|Tiso_gene_15093|Tiso_gene_17234|Tiso_gene_20330|Tiso_gene_9268|Tiso_gene_4516}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_13463

  • right end position:
    • 4689
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2389
  • centisome position:
    • 38.07778
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13463&oldid=47503"