Difference between revisions of "POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXY-METHYL-BUTENYL-DIP HYDROXY-METHYL-BUTENYL-DIP] == * smiles: ** CC(CO)=CCOP(OP([O-])(=O)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN] == * direction: ** R...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXY-METHYL-BUTENYL-DIP HYDROXY-METHYL-BUTENYL-DIP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=MDSIZRKJVDMQOQ-GORDUTHDSA-K
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* common name:
 
* common name:
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** (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
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** nucleotidyltransferase_domain_containing_protein
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* molecular weight:
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* ec number:
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** 259.069   
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** [http://enzyme.expasy.org/EC/2.7.7.19 EC-2.7.7.19]
 
* Synonym(s):
 
* Synonym(s):
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** (E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate
 
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** HMBDP
 
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** 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ISPH2-RXN]]
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* With identifiers:
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* [[RXN0-884]]
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** 1 [[ATP]][c] '''+''' 1 [[mRNAs]][c] '''<=>''' 1 [[mRNAs]][c] '''+''' 1 [[PPI]][c]
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* [[IDS2]]
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* With common name(s):
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* [[R07219]]
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** 1 ATP[c] '''+''' 1 an mRNA[c] '''<=>''' 1 an mRNA[c] '''+''' 1 diphosphate[c]
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* [[IDS1]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[RXN0-882]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-15878]]
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* Gene: [[Tiso_gene_11334]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-in-silico_annotation]]
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* [[HDS]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21597501 21597501]
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** [http://www.uniprot.org/uniprot/P44439 P44439]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9I5A6 Q9I5A6]
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** [http://www.chemspider.com/Chemical-Structure.10224038.html 10224038]
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** [http://www.uniprot.org/uniprot/Q9I657 Q9I657]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9JV08 Q9JV08]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=128753 128753]
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** [http://www.uniprot.org/uniprot/Q9KVV5 Q9KVV5]
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* BIGG : h2mb4p
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** [http://www.uniprot.org/uniprot/P0ABF1 P0ABF1]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9CFC2 Q9CFC2]
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** [http://www.genome.jp/dbget-bin/www_bget?C11811 C11811]
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** [http://www.uniprot.org/uniprot/P07617 P07617]
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{{#set: smiles=CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P32129 P32129]
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{{#set: inchi key=InChIKey=MDSIZRKJVDMQOQ-GORDUTHDSA-K}}
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** [http://www.uniprot.org/uniprot/Q98199 Q98199]
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{{#set: common name=(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate}}
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** [http://www.uniprot.org/uniprot/Q98244 Q98244]
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{{#set: molecular weight=259.069    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=(E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate|HMBDP|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate}}
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{{#set: common name=nucleotidyltransferase_domain_containing_protein}}
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{{#set: consumed by=ISPH2-RXN|RXN0-884|IDS2|R07219|IDS1}}
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{{#set: ec number=EC-2.7.7.19}}
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{{#set: produced by=RXN0-882|RXN-15878}}
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{{#set: gene associated=Tiso_gene_11334}}
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{{#set: consumed or produced by=HDS}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:17, 21 March 2018

Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • nucleotidyltransferase_domain_containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 an mRNA[c] <=> 1 an mRNA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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