Difference between revisions of "2.4.1.198-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** d-3-phosphogly...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.198-RXN 2.4.1.198-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.198-RXN 2.4.1.198-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** d-3-phosphoglycerate_dehydrogenase
 
−
** ORF
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
+
** [http://enzyme.expasy.org/EC/2.4.1.198 EC-2.4.1.198]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-452]][c] '''+''' 1 [[UDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-phospho-D-glycerate[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 H+[c]
+
** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''<=>''' 1 H+[c] '''+''' 1 a 6-(N-acetyl-&alpha;-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol[c] '''+''' 1 UDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18904]]
+
* Gene: [[Tiso_gene_12400]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17123]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15686]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6223]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6224]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15687]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14789 14789]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02654 R02654]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q58424 Q58424]
+
−
** [http://www.uniprot.org/uniprot/P43885 P43885]
+
−
** [http://www.uniprot.org/uniprot/P35136 P35136]
+
−
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
+
−
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
+
−
** [http://www.uniprot.org/uniprot/P40510 P40510]
+
−
** [http://www.uniprot.org/uniprot/P40054 P40054]
+
−
** [http://www.uniprot.org/uniprot/O49485 O49485]
+
−
** [http://www.uniprot.org/uniprot/P87228 P87228]
+
−
** [http://www.uniprot.org/uniprot/O04130 O04130]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=d-3-phosphoglycerate_dehydrogenase}}
+
{{#set: ec number=EC-2.4.1.198}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_12400}}
−
{{#set: ec number=EC-1.1.1.95}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_18904|Tiso_gene_17123|Tiso_gene_15686|Tiso_gene_6223|Tiso_gene_6224|Tiso_gene_15687}}
+
−
{{#set: in pathway=SERSYN-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 21:17, 21 March 2018

Reaction 2.4.1.198-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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