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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=VALINE--TRNA-LIGASE-RXN VALINE--TRNA-LIGASE-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Hydroxyglutaryl-ACP-methyl-ester 3-Hydroxyglutaryl-ACP-methyl-ester] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** ORF | + | ** a (3R)-3-hydroxyglutaryl-[acp] methyl ester |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.9 EC-6.1.1.9]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[RXN-11477]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[VAL]][c] '''+''' 1 [[VAL-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-VAL-tRNAs]][c] '''+''' 1 [[PPI]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | * [[RXN-11476]] |
| − | ** 1 ATP[c] '''+''' 1 L-valine[c] '''+''' 1 a tRNAval[c] '''=>''' 1 AMP[c] '''+''' 1 an L-valyl-[tRNAval][c] '''+''' 1 diphosphate[c]
| + | == Reaction(s) of unknown directionality == |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_1372]] | + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8041]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways == | + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a (3R)-3-hydroxyglutaryl-[acp] methyl ester}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10704 10704]
| + | {{#set: consumed by=RXN-11477}} |
| − | * LIGAND-RXN:
| + | {{#set: produced by=RXN-11476}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03665 R03665]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P28350 P28350]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P36420 P36420]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56000 P56000]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51680 O51680]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67411 O67411]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83998 O83998]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZCN6 Q9ZCN6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z987 Q9Z987]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X2D7 Q9X2D7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZK61 Q9ZK61]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CDP6 Q9CDP6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58413 Q58413]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43834 P43834]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PPE4 Q9PPE4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84304 O84304]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47576 P47576]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q94678 Q94678]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q04462 Q04462]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P26640 P26640]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q05873 Q05873]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q26177 Q26177]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75304 P75304]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q49021 Q49021]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11931 P11931]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07806 P07806]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07118 P07118]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O77443 O77443]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: ec number=EC-6.1.1.9}}
| + | |
| − | {{#set: gene associated=Tiso_gene_1372|Tiso_gene_8041}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}} | + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
