Difference between revisions of "Tiso gene 20417"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Gene == Gene Tiso_gene_20417 == * right end position: ** 1315 * transcription direction: ** POSITIVE * left end position: ** 27 * centisome position: ** 1.9607844...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATIN-RXN AGMATIN-RXN] ==
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== Gene Tiso_gene_20417 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1315
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.3.11 EC-3.5.3.11]
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** POSITIVE
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* left end position:
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** 27
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* centisome position:
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** 1.9607844   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CARBONYL-REDUCTASE-NADPH-RXN]]
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** 1 [[AGMATHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[PUTRESCINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 agmatine[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 putrescine[c]
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* Reaction: [[MANNURONATE-REDUCTASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_4415]]
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-823 PWY0-823]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-40]], putrescine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-40 PWY-40]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1315}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13929 13929]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=27}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01157 R01157]
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{{#set: centisome position=1.9607844    }}
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* UNIPROT:
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{{#set: reaction associated=CARBONYL-REDUCTASE-NADPH-RXN|MANNURONATE-REDUCTASE-RXN}}
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** [http://www.uniprot.org/uniprot/P60654 P60654]
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** [http://www.uniprot.org/uniprot/P60653 P60653]
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** [http://www.uniprot.org/uniprot/P60651 P60651]
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** [http://www.uniprot.org/uniprot/Q57757 Q57757]
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** [http://www.uniprot.org/uniprot/P73270 P73270]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.3.11}}
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{{#set: gene associated=Tiso_gene_4415}}
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{{#set: in pathway=PWY-6305|PWY0-823|PWY-40}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:18, 21 March 2018

Gene Tiso_gene_20417

  • right end position:
    • 1315
  • transcription direction:
    • POSITIVE
  • left end position:
    • 27
  • centisome position:
    • 1.9607844
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20417&oldid=47587"