Difference between revisions of "RXN-17846"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] == * direction: ** LEFT-TO-RIGHT * common name: ** FAD-dependent 3-benzyl-3,6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** leucyl_phenylalanyl-...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase
+
** ORF
−
** sulfhydryl_oxidase
+
** leucyl_phenylalanyl-trna--protein_transferase
−
** sulfhydryl_oxidase_1
+
** leucyl_phenylalanyl-trna--protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.3.2 EC-1.8.3.2]
+
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-17049]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-17050]][c]
+
** 1 [[Protein-N-terminal-L-Arginine]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''=>''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[L-leucyl-L-arginyl-Protein]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3-benzyl-3,6 -disulfide-6-(hydroxymethyl)-diketopiperazine[c]
+
** 1 an N-terminal arginyl-[protein][c] '''+''' 1 an L-leucyl-[tRNAleu][c] '''=>''' 1 a tRNAleu[c] '''+''' 1 a [protein] N-terminal L-leucyl-L-arginine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17069]]
+
* Gene: [[Tiso_gene_8540]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Tiso_gene_12069]]
+
* Gene: [[Tiso_gene_13698]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_2584]]
−
* [[Tiso_gene_9472]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_20163]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4530]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_13846]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16192]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_8416]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_20164]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_3314]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7321]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_12454]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_13847]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7533]], gliotoxin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7533 PWY-7533]
+
* [[PWY-7801]], N-end rule pathway I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7801 PWY-7801]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=sulfhydryl_oxidase}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
−
{{#set: common name=sulfhydryl_oxidase_1}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
−
{{#set: ec number=EC-1.8.3.2}}
+
{{#set: ec number=EC-2.3.2.6}}
−
{{#set: gene associated=Tiso_gene_17069|Tiso_gene_12069|Tiso_gene_9472|Tiso_gene_20163|Tiso_gene_4530|Tiso_gene_13846|Tiso_gene_16192|Tiso_gene_8416|Tiso_gene_20164|Tiso_gene_3314|Tiso_gene_7321|Tiso_gene_12454|Tiso_gene_13847}}
+
{{#set: gene associated=Tiso_gene_8540|Tiso_gene_13698|Tiso_gene_2584}}
−
{{#set: in pathway=PWY-7533}}
+
{{#set: in pathway=PWY-7801}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 21:18, 21 March 2018

Reaction RXN-17846

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • leucyl_phenylalanyl-trna--protein_transferase
    • leucyl_phenylalanyl-trna--protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7801, N-end rule pathway I (prokaryotic): PWY-7801
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17846&oldid=47624"