Difference between revisions of "3.1.13.4-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO2-LIPID-A KDO2-LIPID-A] == * smiles: ** CCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC4(C(C(OCC1(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.4-RXN 3.1.13.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nocturin * ec number:...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO2-LIPID-A KDO2-LIPID-A] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.4-RXN 3.1.13.4-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC4(C(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC2(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C2))C3))C4OP([O-])([O-])=O)NC(CC(OC(CCCCCCCCCCC)=O)CCCCCCCCCCC)=O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DIXUKJUHGLIZGU-PPLOIMQXSA-H
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* common name:
 
* common name:
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** α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A
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** nocturin
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* molecular weight:
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* ec number:
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** 2232.696   
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** [http://enzyme.expasy.org/EC/3.1.13.4 EC-3.1.13.4]
 
* Synonym(s):
 
* Synonym(s):
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** Re endotoxin
 
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** (Kdo)2-lipid A
 
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** Kdo2-lipid A
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[MYRISTOYLACYLTRAN-RXN]]
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** 1 [[mRNAs-With-PolyA-Tails]][c] '''+''' n [[WATER]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[mRNAs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a mRNA with poly(A) tail[c] '''+''' n H2O[c] '''=>''' n AMP[c] '''+''' 1 an mRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17497]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17498]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17499]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820278 91820278]
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** [http://www.uniprot.org/uniprot/P32521 P32521]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q09798 Q09798]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58540 58540]
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{{#set: direction=LEFT-TO-RIGHT}}
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* BIGG : lipa
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{{#set: common name=nocturin}}
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* LIGAND-CPD:
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{{#set: ec number=EC-3.1.13.4}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06026 C06026]
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{{#set: gene associated=Tiso_gene_17497|Tiso_gene_17498|Tiso_gene_17499}}
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{{#set: smiles=CCCCCCCCCCCCCC(=O)OC(CCCCCCCCCCC)CC(=O)OC4(C(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(OC2(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C2))C3))C4OP([O-])([O-])=O)NC(CC(OC(CCCCCCCCCCC)=O)CCCCCCCCCCC)=O)}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=DIXUKJUHGLIZGU-PPLOIMQXSA-H}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: molecular weight=2232.696    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=Re endotoxin|(Kdo)2-lipid A|Kdo2-lipid A}}
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{{#set: produced by=MYRISTOYLACYLTRAN-RXN}}
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Latest revision as of 20:18, 21 March 2018

Reaction 3.1.13.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nocturin
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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