Difference between revisions of "GMP-SYN-GLUT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_17130 == * left end position: ** 62 * transcription direction: ** POSITIVE * right end position: ** 1650 * centisome position: ** 1.5909674...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_ami...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_17130 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] ==
−
* left end position:
+
* direction:
−
** 62
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** glutamine_amidotransferase
−
* right end position:
+
* ec number:
−
** 1650
+
** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2]
−
* centisome position:
+
−
** 1.5909674   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-6883]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 2 [[PROTON]][c]
−
***automated-name-match
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 AMP[c] '''+''' 1 GMP[c] '''+''' 2 H+[c]
−
== Pathways associated ==
+
 
−
* [[PWY-4302]]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6657]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=62}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680]
−
{{#set: right end position=1650}}
+
* LIGAND-RXN:
−
{{#set: centisome position=1.5909674    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
−
{{#set: reaction associated=RXN-6883}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-4302}}
+
** [http://www.uniprot.org/uniprot/P32073 P32073]
 +
** [http://www.uniprot.org/uniprot/P49915 P49915]
 +
** [http://www.uniprot.org/uniprot/O25165 O25165]
 +
** [http://www.uniprot.org/uniprot/Q58531 Q58531]
 +
** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
 +
** [http://www.uniprot.org/uniprot/P29727 P29727]
 +
** [http://www.uniprot.org/uniprot/O66601 O66601]
 +
** [http://www.uniprot.org/uniprot/P49056 P49056]
 +
** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
 +
** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
 +
** [http://www.uniprot.org/uniprot/P44335 P44335]
 +
** [http://www.uniprot.org/uniprot/P38625 P38625]
 +
** [http://www.uniprot.org/uniprot/P49057 P49057]
 +
** [http://www.uniprot.org/uniprot/P04079 P04079]
 +
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glutamine_amidotransferase}}
 +
{{#set: ec number=EC-6.3.5.2}}
 +
{{#set: gene associated=Tiso_gene_6657}}
 +
{{#set: in pathway=PWY-7221}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:18, 21 March 2018

Reaction GMP-SYN-GLUT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamine_amidotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 ATP[c] + 1 H2O[c] + 1 XMP[c] => 1 diphosphate[c] + 1 L-glutamate[c] + 1 AMP[c] + 1 GMP[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GMP-SYN-GLUT-RXN&oldid=47637"