Difference between revisions of "1.5.1.9-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5FTHFt 5FTHFt] == * direction: ** REVERSIBLE * common name: ** 5-Formyltetrahydrofolate uptake carr...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** saccharopine_dehydrogen...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5FTHFt 5FTHFt] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 5-Formyltetrahydrofolate uptake carrier, plasma membrane
+
** saccharopine_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.5.1.9 EC-1.5.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[PROTON]][e] '''+''' 1.0 [[5-FORMYL-THF]][e] '''<=>''' 1.0 [[PROTON]][c] '''+''' 1.0 [[5-FORMYL-THF]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[ALLYSINE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[e] '''+''' 1.0 (6S)-5-formyl-tetrahydrofolate mono-L-glutamate[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 (6S)-5-formyl-tetrahydrofolate mono-L-glutamate[c]
+
** 1 H2O[c] '''+''' 1 L-saccharopine[c] '''+''' 1 NAD+[c] '''=>''' 1 (S)-2-amino-6-oxohexanoate[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19115]]
+
* Gene: [[Tiso_gene_7039]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_1156]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_10095]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_7038]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_9366]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4160]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=5-Formyltetrahydrofolate uptake carrier, plasma membrane}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24520 24520]
−
{{#set: gene associated=Tiso_gene_19115}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: common name=saccharopine_dehydrogenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-1.5.1.9}}
 +
{{#set: gene associated=Tiso_gene_7039|Tiso_gene_1156|Tiso_gene_10095|Tiso_gene_7038|Tiso_gene_9366|Tiso_gene_4160}}
 +
{{#set: in pathway=LYSINE-DEG1-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:18, 21 March 2018

Reaction 1.5.1.9-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • saccharopine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-saccharopine[c] + 1 NAD+[c] => 1 (S)-2-amino-6-oxohexanoate[c] + 1 NADH[c] + 1 L-glutamate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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