Difference between revisions of "Tiso gene 8669"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4366 RXNQT-4366] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** para-nitrobenzyl_e...")
(Created page with "Category:Gene == Gene Tiso_gene_8669 == * right end position: ** 8938 * transcription direction: ** POSITIVE * left end position: ** 6109 * centisome position: ** 61.09610...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4366 RXNQT-4366] ==
+
== Gene Tiso_gene_8669 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8938
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
** para-nitrobenzyl_esterase
+
* left end position:
−
** alpha_beta_hydrolase_fold_protein
+
** 6109
−
** alpha_beta_hydrolase
+
* centisome position:
−
** sialate_o-acetylesterase-like_protein
+
** 61.096107   
−
** serine_esterase
+
−
** lysophospholipase
+
−
** protein_chloroplastic
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.2.1.21-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-6442]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[METOH]][c] '''+''' 1 [[CPD-110]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 methylsalicylate[c] '''=>''' 1 H+[c] '''+''' 1 methanol[c] '''+''' 1 salicylate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
* Reaction: [[RXN-10769]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_1922]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_12686]]
+
* Reaction: [[RXN-10773]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_10066]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
* Reaction: [[RXN-13602]]
−
* [[Tiso_gene_4606]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_9429]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN-13603]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_11351]]
+
*** Assignment: ec-number
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: ec-number
−
* [[Tiso_gene_19778]]
+
* Reaction: [[RXN-14179]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_4650]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
* Reaction: [[RXN-5341]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_17029]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_16518]]
+
* Reaction: [[RXN-8036]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2556]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_1537]]
+
* Reaction: [[RXN-9674]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1538]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-3121]]
 +
* [[PWY-6002]]
 +
* [[PWY-6788]]
 +
* [[PWY-5176]]
 +
* [[PWY-7092]]
 +
* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=8938}}
−
{{#set: common name=ORF}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=para-nitrobenzyl_esterase}}
+
{{#set: left end position=6109}}
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: centisome position=61.096107    }}
−
{{#set: common name=alpha_beta_hydrolase}}
+
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
−
{{#set: common name=serine_esterase}}
+
−
{{#set: common name=lysophospholipase}}
+
−
{{#set: common name=protein_chloroplastic}}
+
−
{{#set: ec number=EC-3.1.1.1}}
+
−
{{#set: gene associated=Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_9429|Tiso_gene_11351|Tiso_gene_19778|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_16518|Tiso_gene_2556|Tiso_gene_1537|Tiso_gene_1538}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:18, 21 March 2018

Gene Tiso_gene_8669

  • right end position:
    • 8938
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6109
  • centisome position:
    • 61.096107
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8669&oldid=47668"