Difference between revisions of "Tiso gene 8669"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-binding_protein * Synon...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8669 == * right end position: ** 8938 * transcription direction: ** POSITIVE * left end position: ** 6109 * centisome position: ** 61.09610...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] ==
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== Gene Tiso_gene_8669 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8938
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* common name:
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* transcription direction:
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** gtp-binding_protein
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** POSITIVE
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* left end position:
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** 6109
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* centisome position:
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** 61.096107   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[RNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''=>''' 1 [[RNA-Ligase-L-lysine]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 2 H+[c] '''+''' 1 a 5'-phospho-ribonucleoside-[RNA][c] '''=>''' 1 an [RNA ligase]-L-lysine[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA][c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-10769]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_8396]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_8398]]
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* Reaction: [[RXN-10773]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_8397]]
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** Source: [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-13602]]
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== Pathways ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[annotation]]:
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** Source: [[annotation-experimental_annotation]]
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** [[pathwaytools]]:
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*** Assignment: ec-number
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*** [[in-silico_annotation]]
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* Reaction: [[RXN-13603]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5341]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8036]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9674]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8938}}
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{{#set: common name=gtp-binding_protein}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_8396|Tiso_gene_8398|Tiso_gene_8397}}
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{{#set: left end position=6109}}
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{{#set: in pathway=}}
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{{#set: centisome position=61.096107    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:18, 21 March 2018

Gene Tiso_gene_8669

  • right end position:
    • 8938
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6109
  • centisome position:
    • 61.096107
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8669&oldid=47668"