Difference between revisions of "Tiso gene 13653"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] == * direction: ** LEFT-TO-RIGHT * common name: ** sarcosine_dehydrogenase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_13653 == * right end position: ** 6139 * transcription direction: ** POSITIVE * left end position: ** 3646 * centisome position: ** 34.3573...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] ==
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== Gene Tiso_gene_13653 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6139
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* common name:
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* transcription direction:
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** sarcosine_dehydrogenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8]
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** 3646
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* centisome position:
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** 34.35733   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[SARCOSINE]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 2 [[ETF-Oxidized]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 2 [[ETF-Reduced]][c] '''+''' 1 [[GLY]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 sarcosine[c] '''+''' 3 H+[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 glycine[c]
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* Reaction: [[NUCLEOSIDE-DIPHOSPHATASE-RXN]]
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** Source: [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[Tiso_gene_14788]]
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** Source: [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12195]]
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
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*** Assignment: automated-name-match
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-12196]]
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== Reconstruction information  ==
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** Source: [[annotation-experimental_annotation]]
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* [[annotation]]:
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*** Assignment: automated-name-match
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** [[pathwaytools]]:
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* Reaction: [[RXN-14024]]
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*** [[in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5462]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6139}}
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{{#set: common name=sarcosine_dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.5.8}}
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{{#set: left end position=3646}}
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{{#set: gene associated=Tiso_gene_14788}}
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{{#set: centisome position=34.35733    }}
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{{#set: in pathway=PWY-3661-1}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-DIPHOSPHATASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN-14024|RXN0-5462}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:18, 21 March 2018

Gene Tiso_gene_13653

  • right end position:
    • 6139
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3646
  • centisome position:
    • 34.35733
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13653&oldid=47677"