Difference between revisions of "DTDPGLUCOSEPP-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_5425 == * left end position: ** 7226 * transcription direction: ** POSITIVE * right end position: ** 9247 * centisome position: ** 53.57752...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5425 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] ==
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* left end position:
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* direction:
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** 7226
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** REVERSIBLE
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/2.7.7.24 EC-2.7.7.24]
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* right end position:
+
−
** 9247
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−
* centisome position:
+
−
** 53.57752   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.2.1.31-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[TTP]][c] '''+''' 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[DTDP-D-GLUCOSE]][c]
−
***ec-number
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* With common name(s):
−
* [[ALCOHOL-DEHYDROG-GENERIC-RXN]]
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** 1 dTTP[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 H+[c] '''<=>''' 1 diphosphate[c] '''+''' 1 dTDP-&alpha;-D-glucose[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[ALCOHOL-DEHYDROG-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_14704]]
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***ec-number
+
** Source: [[orthology-synechocystis]]
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* [[ALLYSINE-DEHYDROG-RXN]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315]
−
***ec-number
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[L-IDITOL-2-DEHYDROGENASE-RXN]]
+
* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316]
−
** in-silico_annotation
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
***ec-number
+
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
−
* [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
−
** in-silico_annotation
+
* [[PWY-7301]], dTDP-4-O-demethyl-&beta;-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
−
***ec-number
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[RXN-10781]]
+
* [[PWY-7657]], dTDP-&beta;-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657]
−
** in-silico_annotation
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
***ec-number
+
* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318]
−
* [[RXN-10855]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** in-silico_annotation
+
* [[PWY-7312]], dTDP-D-&beta;-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
−
***ec-number
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[RXN-10911]]
+
* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
−
** in-silico_annotation
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
***ec-number
+
* [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104]
−
* [[RXN-10915]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** in-silico_annotation
+
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814]
−
***ec-number
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[RXN-12448]]
+
* [[PWY-7440]], dTDP-&beta;-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
−
** in-silico_annotation
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
***ec-number
+
* [[PWY-6953]], dTDP-3-acetamido-&alpha;-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
−
* [[RXN-12560]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808]
−
***ec-number
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[RXN-13198]]
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* [[PWY-7413]], dTDP-6-deoxy-&alpha;-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413]
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** in-silico_annotation
+
** '''2''' reactions found over '''4''' reactions in the full pathway
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***ec-number
+
* [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
−
* [[RXN-13279]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
−
** in-silico_annotation
+
* [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
−
***ec-number
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-5424]]
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* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974]
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** in-silico_annotation
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** '''2''' reactions found over '''7''' reactions in the full pathway
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***ec-number
+
* [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973]
−
* [[RXN-5901]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
−
** in-silico_annotation
+
* [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221]
−
***ec-number
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-7644]]
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* [[PWY-7414]], dTDP-&alpha;-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414]
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** in-silico_annotation
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
***ec-number
+
== Reconstruction information  ==
−
* [[RXN-7657]]
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* Category: [[orthology]]
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** in-silico_annotation
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** Source: [[orthology-synechocystis]]
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***ec-number
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*** Tool: [[pantograph]]
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* [[RXN-7693]]
+
−
** in-silico_annotation
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−
***ec-number
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−
* [[RXN-7694]]
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−
** in-silico_annotation
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−
***ec-number
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−
* [[RXN-7700]]
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−
** in-silico_annotation
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−
***ec-number
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−
* [[RXN-7706]]
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−
** in-silico_annotation
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−
***ec-number
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−
* [[RXN3O-4113]]
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−
** in-silico_annotation
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−
***ec-number
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−
* [[RXN66-478]]
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** in-silico_annotation
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−
***ec-number
+
−
== Pathways associated ==
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−
* [[PWY66-21]]
+
−
* [[PWY-7111]]
+
−
* [[PWY-6587]]
+
−
* [[PWY-5676]]
+
−
* [[PWY-5082]]
+
−
* [[PWY-7118]]
+
−
* [[PWY-7013]]
+
−
* [[PWY-3162]]
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−
* [[PWY-5751]]
+
−
* [[PWY-6342]]
+
−
* [[PWY1-3]]
+
−
* [[P161-PWY]]
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−
* [[ETOH-ACETYLCOA-ANA-PWY]]
+
−
* [[FERMENTATION-PWY]]
+
−
* [[PWY-6871]]
+
−
* [[PWY-7396]]
+
−
* [[PWY-5057]]
+
−
* [[PWY-5741]]
+
−
* [[PWY-5076]]
+
−
* [[PWY-6333]]
+
−
* [[PWY-5486]]
+
−
* [[PWY-5079]]
+
−
* [[PWY-5078]]
+
−
* [[PWY-6313]]
+
−
* [[PWY66-425]]
+
−
* [[PWY-5480]]
+
−
* [[PWY3O-4108]]
+
−
* [[PWY-7216]]
+
−
* [[PWY-6802]]
+
−
* [[LYSINE-DEG1-PWY]]
+
−
* [[P122-PWY]]
+
−
* [[PWY66-389]]
+
−
* [[PWY4LZ-257]]
+
−
* [[PWY-4101]]
+
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7226}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
−
{{#set: right end position=9247}}
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* LIGAND-RXN:
−
{{#set: centisome position=53.57752    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02328 R02328]
−
{{#set: reaction associated=1.2.1.31-RXN|ALCOHOL-DEHYDROG-GENERIC-RXN|ALCOHOL-DEHYDROG-RXN|ALLYSINE-DEHYDROG-RXN|L-IDITOL-2-DEHYDROGENASE-RXN|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|RXN-10781|RXN-10855|RXN-10911|RXN-10915|RXN-12448|RXN-12560|RXN-13198|RXN-13279|RXN-5424|RXN-5901|RXN-7644|RXN-7657|RXN-7693|RXN-7694|RXN-7700|RXN-7706|RXN3O-4113|RXN66-478}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY66-21|PWY-7111|PWY-6587|PWY-5676|PWY-5082|PWY-7118|PWY-7013|PWY-3162|PWY-5751|PWY-6342|PWY1-3|P161-PWY|ETOH-ACETYLCOA-ANA-PWY|FERMENTATION-PWY|PWY-6871|PWY-7396|PWY-5057|PWY-5741|PWY-5076|PWY-6333|PWY-5486|PWY-5079|PWY-5078|PWY-6313|PWY66-425|PWY-5480|PWY3O-4108|PWY-7216|PWY-6802|LYSINE-DEG1-PWY|P122-PWY|PWY66-389|PWY4LZ-257|PWY-4101}}
+
** [http://www.uniprot.org/uniprot/P55256 P55256]
 +
** [http://www.uniprot.org/uniprot/O27819 O27819]
 +
** [http://www.uniprot.org/uniprot/Q58501 Q58501]
 +
** [http://www.uniprot.org/uniprot/P37744 P37744]
 +
** [http://www.uniprot.org/uniprot/P72017 P72017]
 +
** [http://www.uniprot.org/uniprot/P61887 P61887]
 +
** [http://www.uniprot.org/uniprot/P57040 P57040]
 +
** [http://www.uniprot.org/uniprot/P26393 P26393]
 +
** [http://www.uniprot.org/uniprot/P55254 P55254]
 +
** [http://www.uniprot.org/uniprot/P55257 P55257]
 +
** [http://www.uniprot.org/uniprot/P37779 P37779]
 +
** [http://www.uniprot.org/uniprot/P37762 P37762]
 +
** [http://www.uniprot.org/uniprot/Q54143 Q54143]
 +
** [http://www.uniprot.org/uniprot/Q56174 Q56174]
 +
** [http://www.uniprot.org/uniprot/Q51149 Q51149]
 +
** [http://www.uniprot.org/uniprot/P55253 P55253]
 +
** [http://www.uniprot.org/uniprot/O66250 O66250]
 +
** [http://www.uniprot.org/uniprot/O08245 O08245]
 +
** [http://www.uniprot.org/uniprot/Q9RR29 Q9RR29]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.7.24}}
 +
{{#set: gene associated=Tiso_gene_14704}}
 +
{{#set: in pathway=PWY-7315|PWY-7316|DTDPRHAMSYN-PWY|PWY-7301|PWY-7657|PWY-7318|PWY-7312|PWY-6942|PWY-7104|PWY-7814|PWY-7440|PWY-6953|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:19, 21 March 2018

Reaction DTDPGLUCOSEPP-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dTTP[c] + 1 α-D-glucopyranose 1-phosphate[c] + 1 H+[c] <=> 1 diphosphate[c] + 1 dTDP-α-D-glucose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7315, dTDP-N-acetylthomosamine biosynthesis: PWY-7315
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7316, dTDP-N-acetylviosamine biosynthesis: PWY-7316
    • 2 reactions found over 4 reactions in the full pathway
  • DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis I: DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis: PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7657, dTDP-β-L-digitoxose biosynthesis: PWY-7657
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7318, dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: PWY-7318
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7312, dTDP-D-β-fucofuranose biosynthesis: PWY-7312
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6942, dTDP-D-desosamine biosynthesis: PWY-6942
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7104, dTDP-L-megosamine biosynthesis: PWY-7104
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7814, dTDP-L-daunosamine biosynthesis: PWY-7814
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7440, dTDP-β-L-4-epi-vancosamine biosynthesis: PWY-7440
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6953, dTDP-3-acetamido-α-D-fucose biosynthesis: PWY-6953
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6808, dTDP-D-forosamine biosynthesis: PWY-6808
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7413, dTDP-6-deoxy-α-D-allose biosynthesis: PWY-7413
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6976, dTDP-L-mycarose biosynthesis: PWY-6976
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7688, dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: PWY-7688
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6974, dTDP-L-olivose biosynthesis: PWY-6974
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6973, dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: PWY-6973
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-3221, dTDP-L-rhamnose biosynthesis II: PWY-3221
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7414, dTDP-α-D-mycaminose biosynthesis: PWY-7414
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DTDPGLUCOSEPP-RXN&oldid=47716"