Difference between revisions of "Tiso gene 6910"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] == * direction: ** L...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6910 == * right end position: ** 5017 * transcription direction: ** POSITIVE * left end position: ** 1611 * centisome position: ** 13.77158...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] ==
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== Gene Tiso_gene_6910 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 5017
* common name:
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* transcription direction:
** ORF
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** POSITIVE
** probable_histone-lysine_n-methyltransferase_nsd2-like
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* left end position:
** histone-lysine_n-methyltransferase_setmar
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** 1611
** histone-lysine_n-_h3_lysine-79_specific
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* centisome position:
** histone-lysine_n-h3lysine-79specific
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** 13.7715845   
** methyltransferase_type_11
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** mixed-lineage_leukemia_protein
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** histone-lysine_n-methyltransferase_mll3
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** histone-lysine_n-_h3_lysine-9_specific_suvh6
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** pentatricopeptide_repeat_domain-containing_protein
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** histone-lysine_n-methyltransferase_suv39h1
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.43 EC-2.1.1.43]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[RXN-15556]]
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Histone-L-lysine]][c] '''=>''' 1 [[CPD-8579]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a [histone]-L-lysine[c] '''=>''' 1 a [histone] N6-methyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
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** Source: [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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*** Assignment: ec-number
Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
* [[Tiso_gene_15293]]
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* [[PWY-7511]]
** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13588]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19883]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18698]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13973]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10659]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3977]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13974]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4657]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14051]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10757]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10896]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_344]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11071]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8895]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11001]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15903]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5703]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2144]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8634]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: right end position=5017}}
** [http://www.genome.jp/dbget-bin/www_bget?R03938 R03938]
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{{#set: transcription direction=POSITIVE}}
* UNIPROT:
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{{#set: left end position=1611}}
** [http://www.uniprot.org/uniprot/Q43088 Q43088]
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{{#set: centisome position=13.7715845    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7511}}
{{#set: common name=probable_histone-lysine_n-methyltransferase_nsd2-like}}
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{{#set: common name=histone-lysine_n-methyltransferase_setmar}}
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{{#set: common name=histone-lysine_n-_h3_lysine-79_specific}}
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{{#set: common name=histone-lysine_n-h3lysine-79specific}}
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{{#set: common name=methyltransferase_type_11}}
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{{#set: common name=mixed-lineage_leukemia_protein}}
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{{#set: common name=histone-lysine_n-methyltransferase_mll3}}
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{{#set: common name=histone-lysine_n-_h3_lysine-9_specific_suvh6}}
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{{#set: common name=pentatricopeptide_repeat_domain-containing_protein}}
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{{#set: common name=histone-lysine_n-methyltransferase_suv39h1}}
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{{#set: ec number=EC-2.1.1.43}}
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{{#set: gene associated=Tiso_gene_15293|Tiso_gene_13588|Tiso_gene_19883|Tiso_gene_18698|Tiso_gene_13973|Tiso_gene_10659|Tiso_gene_3977|Tiso_gene_13974|Tiso_gene_4657|Tiso_gene_14051|Tiso_gene_10757|Tiso_gene_10896|Tiso_gene_344|Tiso_gene_11071|Tiso_gene_8895|Tiso_gene_11001|Tiso_gene_15903|Tiso_gene_5703|Tiso_gene_2144|Tiso_gene_8634}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_6910

  • right end position:
    • 5017
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1611
  • centisome position:
    • 13.7715845
  • Synonym(s):

Reactions associated

Pathways associated

External links