Difference between revisions of "Tiso gene 5281"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...")
(Created page with "Category:Gene == Gene Tiso_gene_5281 == * right end position: ** 5113 * transcription direction: ** POSITIVE * left end position: ** 3545 * centisome position: ** 25.88914...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
+
== Gene Tiso_gene_5281 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5113
−
* common name:
+
* transcription direction:
−
** Photosystem II D2 protein
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
+
** 3545
 +
* centisome position:
 +
** 25.889141   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[GLYOXII-RXN]]
−
** 2 [[PLASTOQUINONE]][c] '''+''' 1 [[Light]][c] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c] '''=>''' 2 [[Plastoquinols]][c] '''+''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 2 a plastoquinone[c] '''+''' 1 hν[c] '''+''' 4 H+[e] '''+''' 2 H2O[c] '''=>''' 2 a plastoquinol[c] '''+''' 4 H+[c] '''+''' 1 oxygen[c]
+
* Reaction: [[RXN-7919]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_13951]]
+
* [[PWY-5386]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5033]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=5113}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3545}}
−
{{#set: common name=Photosystem II D2 protein}}
+
{{#set: centisome position=25.889141    }}
−
{{#set: ec number=EC-1.10.3.9}}
+
{{#set: reaction associated=GLYOXII-RXN|RXN-7919}}
−
{{#set: gene associated=Tiso_gene_13951|Tiso_gene_5033}}
+
{{#set: pathway associated=PWY-5386}}
−
{{#set: in pathway=PWY-101}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_5281

  • right end position:
    • 5113
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3545
  • centisome position:
    • 25.889141
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5281&oldid=47739"