Difference between revisions of "HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] == * direction: ** L...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** probable_histone-lysine_n-methyltransferase_nsd2-like
 +
** histone-lysine_n-methyltransferase_setmar
 +
** histone-lysine_n-_h3_lysine-79_specific
 +
** histone-lysine_n-h3lysine-79specific
 +
** methyltransferase_type_11
 +
** mixed-lineage_leukemia_protein
 +
** histone-lysine_n-methyltransferase_mll3
 +
** histone-lysine_n-_h3_lysine-9_specific_suvh6
 +
** pentatricopeptide_repeat_domain-containing_protein
 +
** histone-lysine_n-methyltransferase_suv39h1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
** [http://enzyme.expasy.org/EC/2.1.1.43 EC-2.1.1.43]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-95]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-97]][c]
+
** 1 [[Histone-L-lysine]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CPD-8579]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 gibberellin A12[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 gibberellin A15 (open lactone form)[c]
+
** 1 a [histone]-L-lysine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a [histone] N6-methyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3330]]
+
* Gene: [[Tiso_gene_19883]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15903]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10757]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15293]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5703]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_344]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8895]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18698]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14051]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11071]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8634]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13974]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4657]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13588]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10659]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2144]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11001]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13973]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10896]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3977]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06322 R06322]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03938 R03938]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q43088 Q43088]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.11}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: common name=probable_histone-lysine_n-methyltransferase_nsd2-like}}
−
{{#set: in pathway=PWY-5070}}
+
{{#set: common name=histone-lysine_n-methyltransferase_setmar}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=histone-lysine_n-_h3_lysine-79_specific}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=histone-lysine_n-h3lysine-79specific}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: common name=methyltransferase_type_11}}
 +
{{#set: common name=mixed-lineage_leukemia_protein}}
 +
{{#set: common name=histone-lysine_n-methyltransferase_mll3}}
 +
{{#set: common name=histone-lysine_n-_h3_lysine-9_specific_suvh6}}
 +
{{#set: common name=pentatricopeptide_repeat_domain-containing_protein}}
 +
{{#set: common name=histone-lysine_n-methyltransferase_suv39h1}}
 +
{{#set: ec number=EC-2.1.1.43}}
 +
{{#set: gene associated=Tiso_gene_19883|Tiso_gene_15903|Tiso_gene_10757|Tiso_gene_15293|Tiso_gene_5703|Tiso_gene_344|Tiso_gene_8895|Tiso_gene_18698|Tiso_gene_14051|Tiso_gene_11071|Tiso_gene_8634|Tiso_gene_13974|Tiso_gene_4657|Tiso_gene_13588|Tiso_gene_10659|Tiso_gene_2144|Tiso_gene_11001|Tiso_gene_13973|Tiso_gene_10896|Tiso_gene_3977}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:19, 21 March 2018

Reaction HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • probable_histone-lysine_n-methyltransferase_nsd2-like
    • histone-lysine_n-methyltransferase_setmar
    • histone-lysine_n-_h3_lysine-79_specific
    • histone-lysine_n-h3lysine-79specific
    • methyltransferase_type_11
    • mixed-lineage_leukemia_protein
    • histone-lysine_n-methyltransferase_mll3
    • histone-lysine_n-_h3_lysine-9_specific_suvh6
    • pentatricopeptide_repeat_domain-containing_protein
    • histone-lysine_n-methyltransferase_suv39h1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links










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