Difference between revisions of "DIHYDROOROT-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_19603 == * left end position: ** 80 * transcription direction: ** POSITIVE * right end position: ** 2175 * centisome position: ** 3.6680422...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: *...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] == |
− | * | + | * direction: |
− | + | ** REVERSIBLE | |
− | + | * common name: | |
− | ** | + | ** ORF |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/3.5.2.3 EC-3.5.2.3] |
− | * | + | |
− | ** 3. | + | |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** in-silico_annotation | + | ** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] |
− | *** | + | * With common name(s): |
− | == Pathways | + | ** 1 (S)-dihydroorotate[c] '''+''' 1 H2O[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_15379]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | == Pathways == | ||
+ | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24296 24296] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993] |
− | {{#set: | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P08955 P08955] | ||
+ | ** [http://www.uniprot.org/uniprot/P27708 P27708] | ||
+ | ** [http://www.uniprot.org/uniprot/Q91437 Q91437] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58885 Q58885] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6] | ||
+ | ** [http://www.uniprot.org/uniprot/P25995 P25995] | ||
+ | ** [http://www.uniprot.org/uniprot/P20051 P20051] | ||
+ | ** [http://www.uniprot.org/uniprot/P06204 P06204] | ||
+ | ** [http://www.uniprot.org/uniprot/P05020 P05020] | ||
+ | ** [http://www.uniprot.org/uniprot/P31301 P31301] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6] | ||
+ | ** [http://www.uniprot.org/uniprot/P46538 P46538] | ||
+ | ** [http://www.uniprot.org/uniprot/P20054 P20054] | ||
+ | ** [http://www.uniprot.org/uniprot/P05990 P05990] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06950 Q06950] | ||
+ | ** [http://www.uniprot.org/uniprot/P72934 P72934] | ||
+ | ** [http://www.uniprot.org/uniprot/P74438 P74438] | ||
+ | ** [http://www.uniprot.org/uniprot/O04904 O04904] | ||
+ | ** [http://www.uniprot.org/uniprot/P72170 P72170] | ||
+ | ** [http://www.uniprot.org/uniprot/O76138 O76138] | ||
+ | ** [http://www.uniprot.org/uniprot/O27199 O27199] | ||
+ | ** [http://www.uniprot.org/uniprot/P48795 P48795] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: ec number=EC-3.5.2.3}} | ||
+ | {{#set: gene associated=Tiso_gene_15379}} | ||
+ | {{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|orthology-creinhardtii|orthology-synechocystis|annotation-in-silico_annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 21:19, 21 March 2018
Contents
Reaction DIHYDROOROT-RXN
- direction:
- REVERSIBLE
- common name:
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DI-H-OROTATE[c] + 1 WATER[c] <=> 1 CARBAMYUL-L-ASPARTATE[c] + 1 PROTON[c]
- With common name(s):
- 1 (S)-dihydroorotate[c] + 1 H2O[c] <=> 1 N-carbamoyl-L-aspartate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_15379
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-synechocystis
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
- PWY-7790, UMP biosynthesis II: PWY-7790
- 6 reactions found over 6 reactions in the full pathway
- PWY-7791, UMP biosynthesis III: PWY-7791
- 5 reactions found over 6 reactions in the full pathway
- PWY-5686, UMP biosynthesis I: PWY-5686
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: