Difference between revisions of "DIHYDROOROT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_19603 == * left end position: ** 80 * transcription direction: ** POSITIVE * right end position: ** 2175 * centisome position: ** 3.6680422...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: *...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_19603 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] ==
−
* left end position:
+
* direction:
−
** 80
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ORF
−
* right end position:
+
* ec number:
−
** 2175
+
** [http://enzyme.expasy.org/EC/3.5.2.3 EC-3.5.2.3]
−
* centisome position:
+
−
** 3.6680422   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[3.1.3.16-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 (S)-dihydroorotate[c] '''+''' 1 H2O[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_15379]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways ==
 +
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=80}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24296 24296]
−
{{#set: right end position=2175}}
+
* LIGAND-RXN:
−
{{#set: centisome position=3.6680422    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
−
{{#set: reaction associated=3.1.3.16-RXN}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P08955 P08955]
 +
** [http://www.uniprot.org/uniprot/P27708 P27708]
 +
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
 +
** [http://www.uniprot.org/uniprot/Q58885 Q58885]
 +
** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
 +
** [http://www.uniprot.org/uniprot/P25995 P25995]
 +
** [http://www.uniprot.org/uniprot/P20051 P20051]
 +
** [http://www.uniprot.org/uniprot/P06204 P06204]
 +
** [http://www.uniprot.org/uniprot/P05020 P05020]
 +
** [http://www.uniprot.org/uniprot/P31301 P31301]
 +
** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
 +
** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
 +
** [http://www.uniprot.org/uniprot/P46538 P46538]
 +
** [http://www.uniprot.org/uniprot/P20054 P20054]
 +
** [http://www.uniprot.org/uniprot/P05990 P05990]
 +
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 +
** [http://www.uniprot.org/uniprot/P72934 P72934]
 +
** [http://www.uniprot.org/uniprot/P74438 P74438]
 +
** [http://www.uniprot.org/uniprot/O04904 O04904]
 +
** [http://www.uniprot.org/uniprot/P72170 P72170]
 +
** [http://www.uniprot.org/uniprot/O76138 O76138]
 +
** [http://www.uniprot.org/uniprot/O27199 O27199]
 +
** [http://www.uniprot.org/uniprot/P48795 P48795]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-3.5.2.3}}
 +
{{#set: gene associated=Tiso_gene_15379}}
 +
{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|orthology-creinhardtii|orthology-synechocystis|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:19, 21 March 2018

Reaction DIHYDROOROT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7790, UMP biosynthesis II: PWY-7790
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III: PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5686, UMP biosynthesis I: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DIHYDROOROT-RXN&oldid=47769"