Difference between revisions of "R02984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-_-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R02984 R02984] == * direction: ** REVERSIBLE * common name: ** R252 * Synonym(s): == Reaction Form...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R02984 R02984] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** endo-_-beta-glucanase
+
** R252
−
** nicotinate-nucleotide_pyrophosphorylase
+
−
** phosphoglycolate_phosphatase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c]
+
** 1.0 [[DTDP-D-GLUCOSE]][c] '''<=>''' 1.0 [[DTDP-D-GALACTOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''=>''' 1 diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 &beta;-nicotinate D-ribonucleotide[c]
+
** 1.0 dTDP-&alpha;-D-glucose[c] '''<=>''' 1.0 dTDP-&alpha;-D-galactose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8723]]
+
* Gene: [[Tiso_gene_15395]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
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***EC-NUMBER
+
−
* [[Tiso_gene_141]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_140]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_12892]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
+
{{#set: common name=R252}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_15395}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
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{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
+
{{#set: reconstruction source=orthology-synechocystis}}
−
** [http://www.uniprot.org/uniprot/Q57916 Q57916]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P30011 P30011]
+
−
** [http://www.uniprot.org/uniprot/P46714 P46714]
+
−
** [http://www.uniprot.org/uniprot/Q15274 Q15274]
+
−
** [http://www.uniprot.org/uniprot/P77938 P77938]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=endo-_-beta-glucanase}}
+
−
{{#set: common name=nicotinate-nucleotide_pyrophosphorylase}}
+
−
{{#set: common name=phosphoglycolate_phosphatase}}
+
−
{{#set: ec number=EC-2.4.2.19}}
+
−
{{#set: gene associated=Tiso_gene_8723|Tiso_gene_141|Tiso_gene_140|Tiso_gene_12892}}
+
−
{{#set: in pathway=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-7342}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:19, 21 March 2018

Reaction R02984

  • direction:
    • REVERSIBLE
  • common name:
    • R252
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R02984&oldid=47789"