Difference between revisions of "RXN-9530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-Δ2-decenoyl-[acp]...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)
 +
** polyketide_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-730]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-11517]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''=>''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate[c] '''+''' 1 ATP[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a (2E)-dec-2-enoyl-[acp][c] '''=>''' 1 a decanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14183]]
+
* Gene: [[Tiso_gene_135]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* Gene: [[Tiso_gene_12275]]
+
*** Assignment: EC-NUMBER
−
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[manual-primary_network]]
−
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07887 R07887]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1}}
+
{{#set: common name=trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)}}
−
{{#set: gene associated=Tiso_gene_14183|Tiso_gene_12275}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: in pathway=PWY-735}}
+
{{#set: ec number=EC-1.3.1.10}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.3.1.39}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: gene associated=Tiso_gene_135|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_500}}
 +
{{#set: in pathway=PWY-5994}}
 +
{{#set: reconstruction category=manual|annotation}}
 +
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:19, 21 March 2018

Reaction RXN-9530

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"trans-Δ2-decenoyl-[acp]reductase (NADPH, B-specific)" cannot be used as a page name in this wiki.






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