Difference between revisions of "Tiso gene 15704"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7580 RXN-7580] == * direction: ** LEFT-TO-RIGHT * common name: ** ent-kaurenal 19-hydroxylase *...")
(Created page with "Category:Gene == Gene Tiso_gene_15704 == * right end position: ** 2370 * transcription direction: ** POSITIVE * left end position: ** 234 * centisome position: ** 4.814814...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7580 RXN-7580] ==
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== Gene Tiso_gene_15704 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2370
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* common name:
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* transcription direction:
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** ent-kaurenal 19-hydroxylase
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** POSITIVE
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* left end position:
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** 234
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* centisome position:
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** 4.8148146   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.6.4.4-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ENT-KAUR-16-EN-19-AL]][c] '''=>''' 1 [[CPD1F-132]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 oxygen[c] '''+''' 1 ent-kaurenal[c] '''=>''' 1 ent-kaur-16-en-19-oate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
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* Reaction: [[5.3.4.1-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[DISULISOM-RXN]]
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* Gene: [[Tiso_gene_1547]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_8263]]
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* Reaction: [[THIOREDOXIN-REDUCT-NADPH-RXN]]
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** Source: [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
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== Pathways associated ==
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[THIOREDOX-PWY]]
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* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2370}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10931 10931]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=234}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06293 R06293]
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{{#set: centisome position=4.8148146    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=1.6.4.4-RXN|5.3.4.1-RXN|DISULISOM-RXN|THIOREDOXIN-REDUCT-NADPH-RXN}}
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{{#set: common name=ent-kaurenal 19-hydroxylase}}
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{{#set: pathway associated=THIOREDOX-PWY}}
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{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
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{{#set: in pathway=PWY-5047|PWY-5034}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_15704

  • right end position:
    • 2370
  • transcription direction:
    • POSITIVE
  • left end position:
    • 234
  • centisome position:
    • 4.8148146
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15704&oldid=47849"