Difference between revisions of "RXN-2902"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2902 RXN-2902] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semialdehyde_d...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2902 RXN-2902] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** methylmalonate-semialdehyde_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''<=>''' 1 [[D-SEDOHEPTULOSE-1-7-P2]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[MALONATE-S-ALD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-erythrose 4-phosphate[c] '''+''' 1 glycerone phosphate[c] '''<=>''' 1 D-sedoheptulose-1,7-bisphosphate[c]
+
** 1 NAD+[c] '''+''' 1 3-oxopropanoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 NADH[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14568]]
+
* Gene: [[Tiso_gene_11323]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
* Gene: [[Tiso_gene_9179]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-synechocystis]]
+
−
* Gene: [[Tiso_gene_65]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_12272]]
+
−
** Source: [[orthology-synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1517]], sedoheptulose bisphosphate bypass: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1517 PWY0-1517]
+
* [[PWY-1781]], &beta;-alanine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1781 PWY-1781]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P562-PWY]], myo-inositol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[BETA-ALA-DEGRADATION-I-PWY]], &beta;-alanine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=BETA-ALA-DEGRADATION-I-PWY BETA-ALA-DEGRADATION-I-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30167 30167]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22992 22992]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01829 R01829]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00705 R00705]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.2}}
+
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_14568|Tiso_gene_9179|Tiso_gene_65|Tiso_gene_12272}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: in pathway=CALVIN-PWY|PWY0-1517}}
+
{{#set: gene associated=Tiso_gene_11323}}
−
{{#set: reconstruction category=orthology|manual}}
+
{{#set: in pathway=PWY-7574|PWY-1781|P562-PWY|BETA-ALA-DEGRADATION-I-PWY}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-synechocystis}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:20, 21 March 2018

Reaction RXN-2902

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylmalonate-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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