Difference between revisions of "Tiso gene 16689"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransf...")
(Created page with "Category:Gene == Gene Tiso_gene_16689 == * right end position: ** 3316 * transcription direction: ** NEGATIVE * left end position: ** 233 * centisome position: ** 5.575496...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] ==
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== Gene Tiso_gene_16689 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3316
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* common name:
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* transcription direction:
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** sterol_methyltransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.143 EC-2.1.1.143]
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** 233
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* centisome position:
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** 5.5754967   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 [[CPD-4101]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-4124]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 24-methylenelophenol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 24-ethylidenelophenol[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11850]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11849]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3316}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21044 21044]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=233}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05776 R05776]
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{{#set: centisome position=5.5754967    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
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{{#set: common name=sterol_methyltransferase}}
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{{#set: ec number=EC-2.1.1.143}}
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{{#set: gene associated=Tiso_gene_11850|Tiso_gene_11849}}
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{{#set: in pathway=PWY-2541}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:20, 21 March 2018

Gene Tiso_gene_16689

  • right end position:
    • 3316
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 233
  • centisome position:
    • 5.5754967
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16689&oldid=47858"