Difference between revisions of "SEDOBISALDOL-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9660 RXN-9660] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-Δ2-decenoyl-[acp]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9660 RXN-9660] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** trans-Δ2-decenoyl-[acp]-reductase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''<=>''' 1 [[D-SEDOHEPTULOSE-1-7-P2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a (2E)-dec-2-enoyl-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 a decanoyl-[acp][c] '''+''' 1 NAD+[c]
+
** 1 D-erythrose 4-phosphate[c] '''+''' 1 glycerone phosphate[c] '''<=>''' 1 D-sedoheptulose-1,7-bisphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10778]]
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* Gene: [[Tiso_gene_14568]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_9179]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_65]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_12272]]
 +
** Source: [[orthology-synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY0-1517]], sedoheptulose bisphosphate bypass: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1517 PWY0-1517]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=trans-&Delta;2-decenoyl-[acp]-reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30167 30167]
−
{{#set: ec number=EC-1.3.1.9}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_10778}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01829 R01829]
−
{{#set: in pathway=PWY-5971}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-4.1.2}}
 +
{{#set: gene associated=Tiso_gene_14568|Tiso_gene_9179|Tiso_gene_65|Tiso_gene_12272}}
 +
{{#set: in pathway=CALVIN-PWY|PWY0-1517}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 

Latest revision as of 20:20, 21 March 2018

Reaction SEDOBISALDOL-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY0-1517, sedoheptulose bisphosphate bypass: PWY0-1517
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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